(6-(Bromomethyl)pyridin-2-yl)methanol

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CAS: 40054-01-1
MF: C7H8NOBr
MW: 202.04852
Synonyms: (6-(Bromomethyl)pyridin-2-yl)methanol

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Paul B. Savage

Brigham Young University
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Kathryn B. Grant

Georgia State University
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Co-reporter: Carla A. Terry, María-José Fernández, Lourdes Gude, Antonio Lorente, and Kathryn B. Grant
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Publication Date(Web):October 20, 2011
DOI: 10.1021/bi200972c
This paper describes the synthesis of a new 9-aminomethylanthracene dye N-substituted with a pyridinylpolyamine side chain (4). The effects of NaCl and KCl on anthracene/DNA interactions were then studied, with the goal of simulating the conditions of high ionic strength that a DNA photosensitizer might encounter in the cell nucleus (∼150 mM of NaCl and 260 mM of KCl). As exemplified by methylene blue (5), the expected effect of increasing ionic strength is to decrease DNA binding and photocleavage yields. In contrast, the addition of 150 mM of NaCl in combination with 260 mM of KCl to photocleavage reactions containing micromolar concentrations of 4 triggers the conversion of supercoiled, nicked, and linear forms of pUC19 plasmid into a highly degraded band of DNA fragments (350 nm hν, pH 7.0). Circular dichroism spectra point to a correlation between salt-induced unwinding of the DNA helix and the increase in DNA photocleavage yields. The results of circular dichroism, UV–vis absorption, fluorescence emission, thermal denaturation, and photocleavage inhibition experiments suggest that the combination of salts causes a change in the DNA binding mode of 4 from intercalation to an external interaction. This in turn leads to an increase in the anthracene-sensitized production of DNA-damaging reactive oxygen species.

Paul Beer

oxford university
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Thorfinnur Gunnlaugsson

University of Dublin
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Wenbin Zeng

Central South University
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