Shohei Sakuda

Find an error

Name:
Organization: The University of Tokyo
Department: Department of Applied Biological Chemistry
Title:
Co-reporter:Yosuke Sato, Shigeo Suzuki, Seiko Muraoka, Naoya Kikuchi, Naotaka Noda, Takafumi Matsumoto, Hiromasa Inoue, Hiromichi Nagasawa, Shohei Sakuda
Bioorganic & Medicinal Chemistry 2011 Volume 19(Issue 10) pp:3054-3059
Publication Date(Web):15 May 2011
DOI:10.1016/j.bmc.2011.04.012
Allosamidins, metabolites of Streptomyces with strong inhibitory activities toward family 18 chitinases, show a variety of biological activities in various organisms. We prepared photoaffinity and biotinylated probes of allosamidin and demethylallosamidin, the N-demethyl derivative that shows much stronger anti-asthmatic activity than allosamidin. Mild acid hydrolysis of allosamidins afforded mono-amine derivatives, which were amidated to prepare probes with a photoactivatable aryl azide and/or biotin moieties. The derivatives with an N-acyl group at C-2 of the D-allosamine residue at the non-reducing end of allosamidins inhibited Trichoderma chitinase as strongly as the original compounds. Since the target of allosamidins in asthma is unclear, photoaffinity probes were used to analyze allosamidin-binding proteins in bronchoalveolar lavage (BAL) fluid in IL-13-induced asthmatic mice. Ym1, a chitinase-like protein, was identified as the main allosamidin-binding protein among proteins whose expression was upregulated by IL-13 in BAL fluid. Binding of allosamidins with Ym1 was confirmed by the experiments with photoaffinity probes and recombinant Ym1.
Co-reporter:Rie Tsuyuki, Tomoya Yoshinari, Naoko Sakamoto, Hiromichi Nagasawa, and Shohei Sakuda
Journal of Agricultural and Food Chemistry 2011 Volume 59(Issue 5) pp:1760-1766
Publication Date(Web):February 7, 2011
DOI:10.1021/jf103969d
The effects of cobalt chloride on the production of trichothecene and ergosterol in Fusarium graminearum were examined. Incorporation experiments with 13C-labeled acetate and leucine confirmed that both 3-acetyldeoxynivalenol and ergosterol were biosynthesized via a mevalonate pathway by the fungus, although hydroxymethyl-glutaryl CoA (HMG-CoA) from intact leucine was able to be partially used for ergosterol production. Addition of cobalt chloride at concentrations of 3−30 μM into liquid culture strongly enhanced 3-acetyldeoxynivalenol production by the fungus, whereas the amount of ergosterol and the mycelial weight of the fungus did not change. The mRNA levels of genes encoding trichothecene biosynthetic proteins (TRI4 and TRI6), ergosterol biosynthetic enzymes (ERG3 and ERG25), and enzymes involved in the mevalonate pathway (HMG-CoA synthase (HMGS) and HMG-CoA reductase (HMGR)) were all strongly up-regulated in the presence of cobalt chloride. Precocene II, a specific trichothecene production inhibitor, suppressed the effects of cobalt chloride on Tri4, Tri6, HMGS, and HMGR, but did not affect erg3 and erg25. These results indicate that cobalt chloride is useful for investigating regulatory mechanisms of trichothecene and ergosterol production in F. graminearum.
Co-reporter:Tomoya Yoshinari, Yoichi Noda, Koji Yoda, Hiroshi Sezaki, Hiromichi Nagasawa and Shohei Sakuda
The Journal of Antibiotics 2010 63(6) pp:309-314
Publication Date(Web):April 23, 2010
DOI:10.1038/ja.2010.36
Blasticidin A (BcA), an antibiotic produced by Streptomyces, inhibits aflatoxin production without strong growth inhibition toward aflatoxin-producing fungi. During the course of our study on the mode of action of BcA by two-dimensional differential gel electrophoresis (2D-DIGE), we found a decrease in the abundances of ribosomal proteins in Saccharomyces cerevisiae after exposure to BcA. This phenomenon was also observed by treatment with blasticidin S (BcS) or cycloheximide. BcA inhibited protein synthesis in a galactose-induced expression system in S. cerevisiae similar to BcS and cycloheximide. BcS, but not cycloheximide, inhibited aflatoxin production in Aspergillus parasiticus without inhibition of fungal growth, similar to BcA. A decrease in the abundances of aflatoxin biosynthetic enzymes was observed in 2D-DIGE experiments with Aspergillus flavus after exposure to BcA or BcS. These results suggested that protein synthesis inhibitors are useful to control aflatoxin production.
Co-reporter:Atsushi Yaguchi, Tomoya Yoshinari, Rie Tsuyuki, Haruo Takahashi, Takashi Nakajima, Yoshiko Sugita-Konishi, Hiromichi Nagasawa and Shohei Sakuda
Journal of Agricultural and Food Chemistry 2009 Volume 57(Issue 3) pp:846-851
Publication Date(Web):January 20, 2009
DOI:10.1021/jf802813h
Inhibitors of deoxynivalenol production by Fusarium graminearum are useful for protecting crops from deoxynivalenol contamination. We isolated precocenes and piperitone from the essential oils of Matricaria recutita and Eucalyptus dives, respectively, as specific inhibitors of the production of 3-acetyldeoxynivalenol, a biosynthetic precursor of deoxynivalenol. Precocenes I and II and piperitone inhibited 3-acetyldeoxynivalenol production by F. graminearum in a liquid culture with IC50 values of 16.6, 1.2, and 306 μM, respectively, without inhibiting fungal growth. Precocene II also inhibited deoxynivalenol production by the fungus in a solid culture on rice with an IC50 value of 2.0 ppm. Precocene II and piperitone decreased the mRNA levels of Tri4, Tri5, Tri6, and Tri10 encoding proteins required for deoxynivalenol biosynthesis.
Co-reporter:Shigeo Suzuki, Eiyu Nakanishi, Tsuyoshi Ohira, Ryu Kawachi, Hiromichi Nagasawa and Shohei Sakuda
The Journal of Antibiotics 2006 59(7) pp:402-409
Publication Date(Web):
DOI:10.1038/ja.2006.57
Allosamidin, a typical secondary metabolite of Streptomyces, has been known as a chitinase inhibitor. We found that allosamidin can dramatically promote chitinase production and growth of its producer, Streptomyces sp. AJ9463, in a chitin medium at a few hundred nM. Allosamidin promoted production of the main chitinase detected in the culture filtrate and the chitin-hydrolytic activity of the chitinase was not inhibited by allosamidin at the concentration. The gene encoding the chitinase showed that it is a family 18 chitinase and it was revealed that two genes encoding proteins constructing two-component regulatory system were present at 5'-upstream region of the chitinase gene. Allosamidin is located in the microbial mycelia cultured in a medium without chitin, but it was released from the mycelia by responding to chitin. These results show that allosamidin acts as a key signal molecule for chitinase production in its producing strain, which may be useful for its growth in chitin-rich environment.
Co-reporter:Shigeo Suzuki, Eiyu Nakanishi, Tsuyoshi Ohira, Ryu Kawachi, Yasuo Ohnishi, Sueharu Horinouchi, Hiromichi Nagasawa and Shohei Sakuda
The Journal of Antibiotics 2006 59(7) pp:410-417
Publication Date(Web):
DOI:10.1038/ja.2006.58
In Streptomyces sp. AJ9463, a producer of chitinase inhibitor allosamidin, allosamidin strongly enhances production of the chitinase mainly secreted to the culture broth in a chitin medium. To clarify the mechanism for regulation of the chitinase production by allosamidin, a disruption experiment of genes encoding proteins constructing a two-component regulatory system present at 5'-upstream region of the chitinase gene was performed. In the disruptant obtained, allosamidin could not promote the chitinase production, but N,N'-diacetylchitobiose, which also enhances production of the same chitinase more weakly than allosamidin, promoted the chitinase production similarly to the case observed in the wild-type strain. Furthermore, by the experiment in an inorganic salt solution, it was shown that allosamidin could not induce the chitinase production without addition of N,N'-diacetylchitobiose. These results show that allosamidin can activate transcription of the chitinase gene through the two-component regulatory system in the presence of N,N'-diacetylchitobiose.
Co-reporter:Takashi Sakurai, Toshio Nishimura, Noboru Otake, Yao Xinsheng, Keiichi Abe, Mitsuhiro Zeida, Hiromichi Nagasawa, Shohei Sakuda
Bioorganic & Medicinal Chemistry Letters 2002 Volume 12(Issue 5) pp:807-810
Publication Date(Web):11 March 2002
DOI:10.1016/S0960-894X(02)00019-7
Two novel triterpenoid saponins with insulin-like activity, termed assamicin I and II, were isolated from the roots of Aesculus assamica Griff. and their structures were characterized as 1 and 2, respectively. They inhibited release of free fatty acids from epinephrine-treated rat adipocytes and enhanced glucose uptake into 3T3-L1 adipocytes.Graphic
Co-reporter:Jae Youn Cho, Peter Rosenthal, Marina Miller, Alexa Pham, Seema Aceves, Shohei Sakuda, David H. Broide
International Immunopharmacology (January 2014) Volume 18(Issue 1) pp:35-42
Publication Date(Web):1 January 2014
DOI:10.1016/j.intimp.2013.10.026
•Allosamidin inhibited AMCase activity in the esophagus.•Allosamidin inhibited OVA induced esophageal eosinophilic inflammation.•Allosamidin inhibited OVA induced esophageal remodeling.•Allosamidin reduced OVA induced eotaxin-1 expression in the esophagus.Studies of AMCase inhibition in mouse models of lung eosinophilic inflammation have produced conflicting results with some studies demonstrating inhibition of eosinophilic inflammation and others not. No studies have investigated the role of AMCase inhibition in eosinophilic esophagitis (EoE). We have used a mouse model of egg (OVA) induced EoE to determine whether pharmacologic inhibition of AMCase with allosamidin reduced eosinophilic inflammation and remodeling in the esophagus in EoE. Administration of intra-esophageal OVA for 6 weeks to BALB/c mice induced increased levels of esophageal eosinophils, mast cells, and features of esophageal remodeling (fibrosis, basal zone hyperplasia, deposition of the extracellular matrix protein fibronectin). Administration of intraperitoneal (ip) allosamidin to BALB/c mice significantly inhibited AMCase enzymatic activity in the esophagus. Pharmacologic inhibition of AMCase with ip allosamidin inhibited both OVA induced increases in esophageal eosinophilic inflammation and OVA induced esophageal remodeling (fibrosis, epithelial basal zone hyperplasia, extracellular matrix deposition of fibronectin). This inhibition of eosinophilic inflammation in the esophagus by ip allosamidin was associated with reduced eotaxin-1 expression in the esophagus. Oral allosamidin inhibited eosinophilic inflammation in the epithelium but did not inhibit esophageal remodeling. These studies suggest that pharmacologic inhibition of AMCase results in inhibition of eosinophilic inflammation and remodeling in the esophagus in a mouse model of egg induced EoE partially through effects in the esophagus on reducing chemokines (i.e. eotaxin-1) implicated in the pathogenesis of EoE.
Co-reporter:Usuma Jermnak, Tomoya Yoshinari, Yasumasa Sugiyama, Rie Tsuyuki, Hiromichi Nagasawa, Shohei Sakuda
International Journal of Food Microbiology (18 September 2014) Volume 187() pp:
Publication Date(Web):18 September 2014
DOI:10.1016/j.ijfoodmicro.2014.07.004
2-METHYL-2-PROPANYL 3-(AMINOMETHYL)-1-AZETIDINECARBOXYLATE
Cyflumetofen
Fluacrypyrim
Benzeneacetamide, a-(methoxyimino)-N-methyl-2-phenoxy-,(aE)-
D-Glucose,2-(acetylamino)-4-O-[2-(acetylamino)-2-deoxy-b-D-glucopyranosyl]-2-deoxy-
1H,11bH,13H-Benzo[a]furo[2,3,4-mn]xanthen-11-ol,2,3,4,4a,5,6,6a,13b-octahydro-4,4,6a,9-tetramethyl-, (4aS,6aS,11bR,13aS,13bS)-
Pyrrolo[1,2-a]pyrazine-1,4-dione, hexahydro-3-methyl-, (3S,8aR)- (9CI)
7H-Furo[3',2':4,5]furo[2,3-c]xanthen-7-one,3a,12c-dihydro-8-hydroxy-6-methoxy-, (3aR,12cS)-
Chitinase
Pyrrolo[1,2-a]pyrazine-1,4-dione,hexahydro-3-(1-methylethyl)-, (3S,8aS)-