Peter H. Seeberger

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Organization: Max Planck Institute of Colloids and Interfaces , Germany
Department: Department of Biomolecular Systems
Title: Professor(PhD)

TOPICS

Co-reporter:Madhu Emmadi, Naeem Khan, Lennart Lykke, Katrin Reppe, Sharavathi G. Parameswarappa, Marilda P. Lisboa, Sandra-Maria Wienhold, Martin Witzenrath, Claney L. Pereira, and Peter H. Seeberger
Journal of the American Chemical Society October 18, 2017 Volume 139(Issue 41) pp:14783-14783
Publication Date(Web):September 25, 2017
DOI:10.1021/jacs.7b07836
Invasive pneumococcal diseases (IPDs) remain the leading cause of vaccine-preventable childhood death, even though highly effective pneumococcal conjugate vaccines (PCVs) are used in national immunization programs in many developing countries. Licensed PCVs currently cover only 13 of the over 90 serotypes of Streptococcus pneumoniae (Sp), so nonvaccine serotypes are a major obstacle to the effective control of IPD. Sp serotype 2 (ST2) is such a nonvaccine serotype that is the main cause of IPD in many countries, including Nepal, Bangladesh, and Guatemala. Glycoconjugate vaccines based on synthetic oligosaccharides instead of isolated polysaccharides offer an attractive alternative to the traditional process for PCV development. To prevent the IPDs caused by ST2, we identified an effective ST2 neoglycoconjugate vaccine candidate that was identified using a medicinal chemistry approach. Glycan microarrays containing a series of synthetic glycans resembling portions of the ST2 capsular polysaccharide (CPS) repeating unit were used to screen human and rabbit sera and identify epitope hits. Synthetic hexasaccharide 2, resembling one repeating unit (RU) of ST2 CPS, emerged as a hit from the glycan array screens. Vaccination with neoglycoconjugates consisting of hexasaccharide 2 coupled to carrier protein CRM197 stimulates a T-cell-dependent B-cell response that induced CPS-specific opsonic antibodies in mice, resulting in killing of encapsulated bacteria by phagocytic activity. Subcutaneous immunization with neoglycoconjugate protected mice from transnasal challenge with the highly virulent ST2 strain NCTC 7466 by reducing the bacterial load in lung tissue and blood.
Co-reporter:Peter H. Seeberger
Perspectives in Science 2017 Volume 11(Volume 11) pp:
Publication Date(Web):1 January 2017
DOI:10.1016/j.pisc.2016.06.085
Carbohydrates are the dominant biopolymer on earth and play important roles ranging from building material for plants to function in many biological systems. Glycans remain poorly studied due to a lack of synthetic tools. The goal of my laboratory has been to develop a general method for the automated assembly of glycans. The general protocols we developed resulted in the commercialisation of the Glyconeer 2.1™ synthesizer as well as the building blocks and all reagents. Oligosaccharides as long as 50-mers are now accessible within days. Rapid access to defined oligosaccharides has been the foundation to many applications including synthetic tools such as glycan microarrays, glycan nanoparticles and anti-glycan antibodies. The platform technology is helping to address real-life problems by the creation of new vaccines and diagnostics. After addressing mainly mammalian glycobiology earlier, material science and plant biology are benefitting increasingly from synthetic glycans.
Co-reporter:Heung Sik Hahm, Felix Broecker, Fumiko Kawasaki, Mario Mietzsch, ... Peter H. Seeberger
Chem 2017 Volume 2, Issue 1(Volume 2, Issue 1) pp:
Publication Date(Web):12 January 2017
DOI:10.1016/j.chempr.2016.12.004
•LacNAc and keratan sulfate glycans were obtained by automated glycan assembly•Linear, branched, and sulfated oligosaccharides up to hexamers were generated•Glycan arrays revealed an interaction between keratan sulfate and AAV virus particlesMammalian glycans are crucial for many disease-relevant processes, including viral infections, but are inaccessible from natural sources in sufficient purity for fine structure-activity studies. Availability of well-defined mammalian-derived synthetic glycans is imperative for unveiling their impact on human physiology. Here, we disclose an automated glycan assembly (AGA) approach to synthesizing oligo-N-acetyllactosamines (LacNAc) and keratan sulfates (KS), two major classes of mammalian glycans. AGA furnished diverse, conjugation-ready LacNAc and KS glycans that helped uncover virus-glycan interactions by microarray and surface plasmon resonance studies. A disulfated KS tetrasaccharide was specifically recognized by the adeno-associated virus AAVrh10 gene-therapy vector and could thus confer viral entry into host cells. This study underlines AGA as a key technology for generating glycan probes with biological activity, in this case with possible implications for cell-type-specific gene delivery.Oligo-N-acetyllactosamine (LacNAc) and keratan sulfate (KS) glycans exert crucial functions in disease-relevant processes, including cancer formation, inflammation, and viral infection. To facilitate structure-activity studies with these glycans, we established a universal strategy to synthesize linear and branched LacNAc as well as differentially sulfated KS oligosaccharides by automated glycan assembly. We synthesized oligosaccharides as long as hexamers by combining four monosaccharide building blocks. Key to the strategy was installing three orthogonal protection groups, 9-fluorenylmethoxycarbonyl (Fmoc), levulinoyl (Lev) ester, and 2-naphthylmethyl (Nap) ether, which were selectively removed from a common oligosaccharide precursor for differential sulfation. Microarrays presenting the synthetic oligosaccharides revealed a specific interaction between a disulfated KS tetrasaccharide and the adeno-associated virus AAVrh10 gene-therapy vector, which was further corroborated by surface plasmon resonance studies. Thus, KS represents a novel receptor candidate for AAVrh10. These insights could have implications for cell-type-specific gene-delivery approaches.Download high-res image (190KB)Download full-size image
Co-reporter:Eike Mucha;Dr. Ana Isabel González Flórez;Dr. Mateusz Marianski;Dr. Daniel A. Thomas;Waldemar Hoffmann;Dr. Weston B. Struwe;Dr. Heung S. Hahm;Sy Gewinner;Dr. Wiel Schöllkopf; Dr. Peter H. Seeberger; Dr. Gert von Helden; Dr. Kevin Pagel
Angewandte Chemie International Edition 2017 Volume 56(Issue 37) pp:11248-11251
Publication Date(Web):2017/09/04
DOI:10.1002/anie.201702896
AbstractThe diversity of stereochemical isomers present in glycans and glycoconjugates poses a formidable challenge for comprehensive structural analysis. Typically, sophisticated mass spectrometry (MS)-based techniques are used in combination with chromatography or ion-mobility separation. However, coexisting structurally similar isomers often render an unambiguous identification impossible. Other powerful techniques such as gas-phase infrared (IR) spectroscopy have been limited to smaller glycans, since conformational flexibility and thermal activation during the measurement result in poor spectral resolution. This limitation can be overcome by using cold-ion spectroscopy. The vibrational fingerprints of cold oligosaccharide ions exhibit a wealth of well-resolved absorption features that are diagnostic for minute structural variations. The unprecedented resolution of cold-ion spectroscopy coupled with tandem MS may render this the key technology to unravel complex glycomes.
Co-reporter:Eike Mucha;Dr. Ana Isabel González Flórez;Dr. Mateusz Marianski;Dr. Daniel A. Thomas;Waldemar Hoffmann;Dr. Weston B. Struwe;Dr. Heung S. Hahm;Sy Gewinner;Dr. Wiel Schöllkopf; Dr. Peter H. Seeberger; Dr. Gert von Helden; Dr. Kevin Pagel
Angewandte Chemie 2017 Volume 129(Issue 37) pp:11400-11404
Publication Date(Web):2017/09/04
DOI:10.1002/ange.201702896
AbstractDie Vielfalt der in Glykanen und ihren Konjugaten vorhandenen stereochemischen Isomere stellt eine Herausforderung für ihre Strukturanalyse dar. Üblicherweise wird Massenspektrometrie (MS) in Kombination mit Flüssigchromatographie oder Ionenmobilitätstrennung verwendet. Allerdings machen strukturell ähnliche Isomere, die häufig koexistieren, eine eindeutige Identifizierung unmöglich. Andere Methoden wie Gasphasen-Infrarot-Spektroskopie waren bisweilen auf kleinere Glykane beschränkt, da die räumliche Flexibilität und die thermische Aktivierung während der Messung eine mangelnde spektrale Auflösung verursachen. Dieses Defizit kann durch Kaltionen-Spektroskopie überwunden werden. Die spektralen Fingerabdrücke kalter Oligosaccharid-Ionen weisen eine beträchtliche Anzahl hochaufgelöster Absorptionsbanden auf, die selbst minimale Strukturvariationen anzeigen. Kaltionen-Spektroskopie könnte sich in Verbindung mit sequenzieller MS als Schlüsseltechnologie zur Strukturbestimmung komplexer Glykome erweisen.
Co-reporter:Benjamin Schumann;Heung Sik Hahm;Sharavathi G. Parameswarappa;Annette Wahlbrink;Katrin Reppe;Subramanian Govindan;Paulina Kaplonek;Liise-anne Pirofski;Martin Witzenrath;Claney L. Pereira;Chakkumkal Anish
Science Translational Medicine 2017 Volume 9(Issue 380) pp:
Publication Date(Web):
DOI:10.1126/scitranslmed.aaf5347

Automated glycan assembly enabled antibody reverse engineering to develop a semisynthetic carbohydrate–based vaccine against the highly virulent Streptococcus pneumoniae serotype 8.

Co-reporter: Dr. Peter H. Seeberger;Dr. Claney L. Pereira;Dr. Naeem Khan;Dr. Guozhi Xiao;Dr. Elizabeth Diago-Navarro;Dr. Katrin Reppe; Dr. Bastian Opitz; Dr. Bettina C. Fries; Dr. Martin Witzenrath
Angewandte Chemie International Edition 2017 Volume 56(Issue 45) pp:13973-13978
Publication Date(Web):2017/11/06
DOI:10.1002/anie.201700964
AbstractHospital-acquired infections are an increasingly serious health concern. Infections caused by carpabenem-resistant Klebsiella pneumoniae (CR-Kp) are especially problematic, with a 50 % average survival rate. CR-Kp are isolated from patients with ever greater frequency, 7 % within the EU but 62 % in Greece. At a time when antibiotics are becoming less effective, no vaccines to protect from this severe bacterial infection exist. Herein, we describe the convergent [3+3] synthesis of the hexasaccharide repeating unit from its capsular polysaccharide and related sequences. Immunization with the synthetic hexasaccharide 1 glycoconjugate resulted in high titers of cross-reactive antibodies against CR-Kp CPS in mice and rabbits. Whole-cell ELISA was used to establish the surface staining of CR-Kp strains. The antibodies raised were found to promote phagocytosis. Thus, this semi-synthetic glycoconjugate is a lead for the development of a vaccine against a rapidly progressing, deadly bacterium.
Co-reporter:Beate Koksch, Peter H Seeberger
Current Opinion in Chemical Biology 2017 Volume 40(Volume 40) pp:
Publication Date(Web):1 October 2017
DOI:10.1016/j.cbpa.2017.10.028
Co-reporter:Martina Delbianco, Priya Bharate, Silvia Varela-Aramburu, and Peter H. Seeberger
Chemical Reviews 2016 Volume 116(Issue 4) pp:1693
Publication Date(Web):December 24, 2015
DOI:10.1021/acs.chemrev.5b00516
Carbohydrates are involved in a variety of biological processes. The ability of sugars to form a large number of hydrogen bonds has made them important components for supramolecular chemistry. We discuss recent advances in the use of carbohydrates in supramolecular chemistry and reveal that carbohydrates are useful building blocks for the stabilization of complex architectures. Systems are presented according to the scaffold that supports the glyco-conjugate: organic macrocycles, dendrimers, nanomaterials, and polymers are considered. Glyco-conjugates can form host–guest complexes, and can self-assemble by using carbohydrate–carbohydrate interactions and other weak interactions such as π–π interactions. Finally, complex supramolecular architectures based on carbohydrate–protein interactions are discussed.
Co-reporter:Chian-Hui Lai, Julia Hütter, Chien-Wei Hsu, Hidenori Tanaka, Silvia Varela-Aramburu, Luisa De Cola, Bernd Lepenies, and Peter H. Seeberger
Nano Letters 2016 Volume 16(Issue 1) pp:807-811
Publication Date(Web):December 13, 2015
DOI:10.1021/acs.nanolett.5b04984
Protein-carbohydrate binding depends on multivalent ligand display that is even more important for low affinity carbohydrate–carbohydrate interactions. Detection and analysis of these low affinity multivalent binding events are technically challenging. We describe the synthesis of dual-fluorescent sugar-capped silicon nanoparticles that proved to be an attractive tool for the analysis of low affinity interactions. These ultrasmall NPs with sizes of around 4 nm can be used for NMR quantification of coupled sugars. The silicon nanoparticles are employed to measure the interaction between the cancer-associated glycosphingolipids GM3 and Gg3 and the associated kD value by surface plasmon resonance experiments. Cell binding studies, to investigate the biological relevance of these carbohydrate–carbohydrate interactions, also benefit from these fluorescent sugar-capped nanoparticles.
Co-reporter:Andreas Geissner, Claney L. Pereira, Melanie Leddermann, Chakkumkal Anish, and Peter H. Seeberger
ACS Chemical Biology 2016 Volume 11(Issue 2) pp:335
Publication Date(Web):December 16, 2015
DOI:10.1021/acschembio.5b00768
Streptococcus pneumoniae is a major cause of mortality and morbidity worldwide. More than 90 S. pneumoniae serotypes are distinguished based on the structure of their primary targets to the human immune system, the capsular polysaccharides (CPSs). The CPS of the prevalent serotype 4 (ST4) is composed of tetrasaccharide repeating units and is included in existing pneumococcal vaccines. Still, the structural antigenic determinants that are essential for protective immunity, including the role of the rare and labile cyclic trans-(2,3) pyruvate ketal modification, remain largely unknown. Molecular insights will support the design of synthetic subunit oligosaccharide vaccines. Here, we identified the key antigenic determinants of ST4 CPS with the help of pyruvated and nonpyruvated synthetic repeating unit glycans. Glycan arrays revealed oligosaccharide antigens recognized by antibodies in the human reference serum. Selected depyruvated ST4 oligosaccharides were used to formulate neoglycoconjugates and immunologically evaluated in mice. These oligosaccharides were highly immunogenic, but the resulting antiglycan antibodies showed only limited binding to the natural CPS present on the bacterial surface. Glycan array and surface plasmon resonance analysis of murine polyclonal serum antibodies as well as monoclonal antibodies revealed that terminal sugars are important in directing the immune responses. The pyruvate modification on the oligosaccharide is needed for cross-reactivity with the native CPS. These findings are an important step toward the design of oligosaccharide-based vaccines against S. pneumoniae ST4.
Co-reporter:Heung Sik Hahm, Chien-Fu Liang, Chian-Hui Lai, Richard J. Fair, Frank Schuhmacher, and Peter H. Seeberger
The Journal of Organic Chemistry 2016 Volume 81(Issue 14) pp:5866-5877
Publication Date(Web):June 6, 2016
DOI:10.1021/acs.joc.6b00554
Lactotetraosyl (Lc4) and neo-lactotetraosyl (nLc4) are backbones that are common to many glycans. Using automated glycan assembly, these common core structures were constructed and elaborated to access synthetically challenging glycans of biological relevance. The incorporation of α-fucoses is demonstrated for H-type I and II; α(1,3)-galactose epitopes were prepared, and the pentasaccharide HNK-1 required incorporation of a 3-O-sulfate. In addition to preparing the target structures, essential insights were gained regarding the relationships of glycosylating agents and nucleophiles as well as the linker stability.
Co-reporter:Peter H. Seeberger
Accounts of Chemical Research 2015 Volume 48(Issue 5) pp:1450
Publication Date(Web):April 14, 2015
DOI:10.1021/ar5004362
Carbohydrates are the most abundant biopolymers on earth and part of every living creature. Glycans are essential as materials for nutrition and for information transfer in biological processes. To date, in few cases a detailed correlation between glycan structure and glycan function has been established. A molecular understanding of glycan function will require pure glycans for biological, immunological, and structural studies. Given the immense structural complexity of glycans found in living organisms and the lack of amplification methods or expression systems, chemical synthesis is the only means to access usable quantities of pure glycan molecules. While the solid-phase synthesis of DNA and peptides has become routine for decades, access to glycans has been technically difficult, time-consuming and confined to a few expert laboratories.In this Account, the development of a comprehensive approach to the automated synthesis of all classes of mammalian glycans, including glycosaminoglycans and glycosylphosphatidyl inositol (GPI) anchors, as well as bacterial and plant carbohydrates is described. A conceptual advance concerning the logic of glycan assembly was required in order to enable automated execution of the synthetic process. Based on the central glycosidic bond forming reaction, a general concept for the protecting groups and leaving groups has been developed. Building blocks that can be procured on large scale, are stable for prolonged periods of time, but upon activation result in high yields and selectivities were identified. A coupling–capping and deprotection cycle was invented that can be executed by an automated synthesis instrument. Straightforward postsynthetic protocols for cleavage from the solid support as well as purification of conjugation-ready oligosaccharides have been established. Introduction of methods to install selectively a wide variety of glycosidic linkages has enabled the rapid assembly of linear and branched oligo- and polysaccharides as large as 30-mers. Fast, reliable access to defined glycans that are ready for conjugation has given rise to glycan arrays, glycan probes, and synthetic glycoconjugate vaccines. While an ever increasing variety of glycans are accessible by automated synthesis, further methodological advances in carbohydrate chemistry are needed to make all possible glycans found in nature. These tools begin to fundamentally impact the medical but also materials aspects of the glycosciences.
Co-reporter:Zhenhui Qi, Priya Bharate, Chian-Hui Lai, Benjamin Ziem, Christoph Böttcher, Andrea Schulz, Fabian Beckert, Benjamin Hatting, Rolf Mülhaupt, Peter H. Seeberger, and Rainer Haag
Nano Letters 2015 Volume 15(Issue 9) pp:6051-6057
Publication Date(Web):August 3, 2015
DOI:10.1021/acs.nanolett.5b02256
A supramolecular carbohydrate-functionalized two-dimensional (2D) surface was designed and synthesized by decorating thermally reduced graphene sheets with multivalent sugar ligands. The formation of host–guest inclusions on the carbon surface provides a versatile strategy, not only to increase the intrinsic water solubility of graphene-based materials, but more importantly to let the desired biofunctional binding groups bind to the surface. Combining the vital recognition role of carbohydrates and the unique 2D large flexible surface area of the graphene sheets, the addition of multivalent sugar ligands makes the resulting carbon material an excellent platform for selectively wrapping and agglutinating Escherichia coli (E. coli). By taking advantage of the responsive property of supramolecular interactions, the captured bacteria can then be partially released by adding a competitive guest. Compared to previously reported scaffolds, the unique thermal IR-absorption properties of graphene derivatives provide a facile method to kill the captured bacteria by IR-laser irradiation of the captured graphene–sugar–E. coli complex.
Co-reporter:Stefan Matthies; Pierre Stallforth
Journal of the American Chemical Society 2015 Volume 137(Issue 8) pp:2848-2851
Publication Date(Web):February 10, 2015
DOI:10.1021/jacs.5b00455
Legionaminic acid is a nine-carbon diamino monosaccharide that is found coating the surface of various bacterial human pathogens. Its unique structure makes it a valuable biological probe, but access via isolation is difficult and no practical synthesis has been reported. We describe a stereoselective synthesis that yields a legionaminic acid building block as well as linker-equipped conjugation-ready legionaminic acid starting from cheap d-threonine. To set the desired amino and hydroxyl group pattern of the target, we designed a concise sequence of stereoselective reactions. The key transformations rely on chelation-controlled organometallic additions and a Petasis multicomponent reaction. The legionaminic acid was synthesized in a form that enables attachment to surfaces. Glycan microarray containing legionaminic acid revealed that human antibodies bind the synthetic glycoside. The synthetic bacterial monosaccharide is a valuable probe to detect an immune response to bacterial pathogens such as Legionella pneumophila, the causative agent of Legionnaire’s disease.
Co-reporter:Tomoya Nobuta, Guozhi Xiao, Diego Ghislieri, Kerry Gilmore and Peter H. Seeberger  
Chemical Communications 2015 vol. 51(Issue 82) pp:15133-15136
Publication Date(Web):24 Aug 2015
DOI:10.1039/C5CC06093A
Five active pharmaceutical ingredients (APIs) containing the vicinyl amino alcohol moiety were synthesized using a convergent chemical assembly system. The continuous system is composed of four flow reaction modules: biphasic oxidation, Corey–Chaykovsky epoxidation, phenol alkylation, and epoxide aminolysis. Judicious choice of reagents and module order allowed for two classes of β-amino alcohols, aryl and aryloxy, to be synthesized in good (27–69%) overall yields.
Co-reporter:Richard J. Fair, Heung Sik Hahm and Peter H. Seeberger  
Chemical Communications 2015 vol. 51(Issue 28) pp:6183-6185
Publication Date(Web):02 Mar 2015
DOI:10.1039/C5CC01368B
A synthetic strategy combining automated solid-phase chemical synthesis and enzymatic sialylation was developed to access α(2,3)-sialylated glycans.
Co-reporter:Stefan Matthies, D. Tyler McQuade, and Peter H. Seeberger
Organic Letters 2015 Volume 17(Issue 15) pp:3670-3673
Publication Date(Web):July 10, 2015
DOI:10.1021/acs.orglett.5b01584
The use of versatile alkynyl-building blocks that are activated by gold(I)-catalysis is demonstrated to efficiently generate a variety of glycosides in continuous flow. The application of a continuous flow setting to gold(I)-catalyzed glycosylations enables very short reaction times and excellent control of the reaction conditions.
Co-reporter:Elsa Zacco, Julia Hütter, Jason L. Heier, Jérémie Mortier, Peter H. Seeberger, Bernd Lepenies, and Beate Koksch
ACS Chemical Biology 2015 Volume 10(Issue 9) pp:2065
Publication Date(Web):June 9, 2015
DOI:10.1021/acschembio.5b00435
The coiled-coil folding motif represents an ideal scaffold for the defined presentation of ligands due to the possibility of positioning them at specific distances along the axis. We created a coiled-coil glycopeptide library to characterize the distances between the carbohydrate-binding sites of the asialoglycoprotein receptors (ASGPR) on hepatocytes. The components of the glycopeptide library vary for the number of displayed ligands (galactose), their position on the peptide sequence, and the space between peptide backbone and carbohydrate. We determined the binding of the glycopeptides to the hepatocytes, and we established the optimal distance and orientation of the galactose moieties for interaction with the ASGPR using flow cytometry. We confirmed that the binding occurs through endocytosis mediated by ASGPR via inhibition studies with cytochalasin D; fluorescence microscopy studies display the uptake of the carrier peptides inside the cell. Thus, this study demonstrates that the coiled-coil motif can be used as reliable scaffold for the rational presentation of ligands.
Co-reporter:Dr. Camille A. Correia;Dr. Kerry Gilmore;Dr. D. Tyler McQuade;Dr. Peter H. Seeberger
Angewandte Chemie 2015 Volume 127( Issue 16) pp:5028-5032
Publication Date(Web):
DOI:10.1002/ange.201411728

Abstract

Das Arzneimittel Efavirenz ist wichtig für die Behandlung von HIV, aber für Millionen von Menschen nicht zugänglich. Hier wird ein neues halbkontinuierliches Verfahren vorgestellt, das die Herstellung von rac-Efavirenz in 45 % Ausbeute ermöglicht. Die optimierte, beispielhafte Synthese basiert auf dem effizienten, kupferkatalysierten Aufbau eines Arylisocyanats und einer anschließenden intramolekularen Cyclisierung zur Einführung des Carbamatkerns von Efavirenz in einem Schritt. Die dreistufige Sequenz stellt die kürzeste Synthese dieses lebenswichtigen Arzneistoffes dar.

Co-reporter:Ju Yuel Baek, Hea-Won Kwon, Se Jin Myung, Jung Jun Park, Mi Young Kim, Dominea C.K. Rathwell, Heung Bae Jeon, Peter H. Seeberger, Kwan Soo Kim
Tetrahedron 2015 Volume 71(Issue 33) pp:5315-5320
Publication Date(Web):19 August 2015
DOI:10.1016/j.tet.2015.06.014
Glucosylations and galactosylations of various acceptors with donors possessing an electron-withdrawing benzylsulfonyl, benzoyl, or acetyl group at the O-3 or O-4 position were performed. A β-directing effect by the benzylsulfonyl group at O-3 of the glucosyl donors and by the benzylsulfonyl and acyl groups at O-4 of the glucosyl donors was observed. In contrast, acyl groups at O-3 of the glucosyl donors and acyl groups at O-3 and O-4 of the galactosyl donors exhibited an α-directing effect. The α-directing effect is partly considered to remote participation of the acyl groups, whereas the β-directing effect is somewhat attributed to the SN2-like reaction of the acceptor with the glycosyl triflate or the contact ion pair, which is stabilized by remote electron-withdrawing groups. Further evidence for the stability of the α-glycosyl triflates was determined by a low-temperature NMR study.
Co-reporter:Anika Reinhardt, You Yang, Heike Claus, Claney L. Pereira, Andrew D. Cox, Ulrich Vogel, Chakkumkal Anish, Peter H. Seeberger
Chemistry & Biology 2015 22(1) pp: 38-49
Publication Date(Web):
DOI:10.1016/j.chembiol.2014.11.016
Co-reporter:Dr. Diego Ghislieri;Dr. Kerry Gilmore ;Dr. Peter H. Seeberger
Angewandte Chemie International Edition 2015 Volume 54( Issue 2) pp:678-682
Publication Date(Web):
DOI:10.1002/anie.201409765

Abstract

While continuous chemical processes have attracted both academic and industrial interest, virtually all active pharmaceutical ingredients (APIs) are still produced by using multiple distinct batch processes. To date, methods for the divergent multistep continuous production of customizable small molecules are not available. A chemical assembly system was developed, in which flow-reaction modules are linked together in an interchangeable fashion to give access to a wide breadth of chemical space. Control at three different levels—choice of starting material, reagent, or order of reaction modules—enables the synthesis of five APIs that represent three different structural classes (γ-amino acids, γ-lactams, β-amino acids), including the blockbuster drugs Lyrica and Gabapentin, in good overall yields (49–75 %).

Co-reporter:Dr. Camille A. Correia;Dr. Kerry Gilmore;Dr. D. Tyler McQuade;Dr. Peter H. Seeberger
Angewandte Chemie International Edition 2015 Volume 54( Issue 16) pp:4945-4948
Publication Date(Web):
DOI:10.1002/anie.201411728

Abstract

Efavirenz is an essential medicine for the treatment of HIV, which is still inaccessible to millions of people worldwide. A novel, semi-continuous process provides rac-Efavirenz with an overall yield of 45 %. This streamlined proof-of-principle synthesis relies on the efficient copper-catalyzed formation of an aryl isocyanate and a subsequent intramolecular cyclization to install the carbamate core of Efavirenz in one step. The three-step method represents the shortest synthesis of this life-saving drug to date.

Co-reporter:Dr. Diego Ghislieri;Dr. Kerry Gilmore;Dr. Peter H. Seeberger
Angewandte Chemie 2015 Volume 127( Issue 2) pp:688-692
Publication Date(Web):
DOI:10.1002/ange.201409765

Abstract

Während kontinuierliche chemische Prozesse in der akademischen Forschung und der Industrie untersucht werden, werden nach wie vor praktisch alle pharmazeutisch aktiven Wirkstoffe (APIs; active pharmaceutical ingredients) über eine Abfolge einzelner Batchprozesse hergestellt. Methoden für die divergente, mehrstufige kontinuierliche Produktion von niedermolekularen Verbindungen sind bislang nicht verfügbar. Wir beschreiben hier die Entwicklung eines chemischen Fertigungssystems bestehend aus austauschbaren Durchflussreaktionsmodulen, das einen großen chemischen Strukturraum zugänglich macht. Die Steuerung des Gesamtprozesses auf drei Ebenen – durch die Wahl des Ausgangsmaterials, der Reagentien oder der Reihenfolge der Module – ermöglichte die Synthese von fünf APIs als Vertreter dreier unterschiedlicher Strukturklassen (γ-Aminosäuren, γ-Lactame, β-Aminosäuren), einschließlich der Bestseller-Medikamente Lyrica und Gabapentin, in guten Gesamtausbeuten (49–75 %).

Co-reporter:Tracy D. Farr, Chian-Hui Lai, Dan Grünstein, Guillermo Orts-Gil, Cheng-Chung Wang, Philipp Boehm-Sturm, Peter H. Seeberger, and Christoph Harms
Nano Letters 2014 Volume 14(Issue 4) pp:2130-2134
Publication Date(Web):February 25, 2014
DOI:10.1021/nl500388h
Activation of the endothelium is a pivotal first step for leukocyte migration into the diseased brain. Consequently, imaging this activation process is highly desirable. We synthesized carbohydrate-functionalized magnetic nanoparticles that bind specifically to the endothelial transmembrane inflammatory proteins E and P selectin. Magnetic resonance imaging revealed that the targeted nanoparticles accumulated in the brain vasculature following acute administration into a clinically relevant animal model of stroke, though increases in selectin expression were observed in both brain hemispheres. Nonfunctionalized naked particles also appear to be a plausible agent to target the ischemic vasculature. The importance of these findings is discussed regarding the potential for translation into the clinic.
Co-reporter:B. Schumann, R. Pragani, C. Anish, C. L. Pereira and P. H. Seeberger  
Chemical Science 2014 vol. 5(Issue 5) pp:1992-2002
Publication Date(Web):11 Mar 2014
DOI:10.1039/C3SC53362J
Commensal bacteria are ubiquitous inhabitants of mucosal surfaces and play an important role in promoting the maturation of the mammalian immune system. Zwitterionic polysaccharides (ZPSs) are found on the surface of certain commensal bacteria and exhibit important immunomodulatory activity. ZPSs are the first known carbohydrate antigens to induce an immune response by a T cell-dependent pathway. To understand the mechanism of their immunomodulatory activity, structurally-defined ZPS probes are needed. Here, we report the first total syntheses of conjugation-ready repeating units of the two most prominent ZPSs, S. pneumoniae Sp1 (1) and B. fragilis PS A1 (2), and their immunological characterization after conjugation to reporter moieties. The introduction of a thioether-containing linker at an early stage of the synthesis called for establishing a method to chemoselectively activate thioglycosides in the presence of benzylthioethers. After oligosaccharide assembly, the same mild activation conditions were used in a novel way to introduce a benzyloxymethyl ether to cap the base-labile AAT residue, which allowed for completion of the syntheses. The appended thiol linkers enabled the conjugation of oligosaccharides 1 and 2 to glycan array and carrier protein moieties. Glycan array analysis revealed recognition of synthetic Sp1, but not PS A1, by antiserum against the native polysaccharide, demonstrating the applicability of conjugation-ready ZPS probes in biochemical settings. Further studies will give insight into the immunomodulatory properties of ZPSs.
Co-reporter:Andreas Geissner, Chakkumkal Anish, Peter H Seeberger
Current Opinion in Chemical Biology 2014 Volume 18() pp:38-45
Publication Date(Web):February 2014
DOI:10.1016/j.cbpa.2013.11.013
•Examining pathogen lectins for binding specificity and selective inhibition.•Understanding host defense: fine specificity study of innate immune receptors.•Anti-glycan antibody analysis to establish carbohydrates as vaccine candidates.•Serum biomarker screening for infectious disease diagnosis.Infectious diseases cause millions of deaths worldwide each year and are a major burden for economies, especially in underdeveloped countries. Glycans and their interactions with other biomolecules are involved in all major steps of infection. Glycan arrays enable the rapid and sensitive detection of those interactions and are among the most powerful techniques to study the molecular biology of infectious diseases. This review will focus on recent developments and discuss the applications of glycan arrays to the elucidation of host–pathogen and pathogen–pathogen interactions, the development of tools for infection diagnosis and the use of glycan arrays in modern vaccine design.
Co-reporter:Kerry Gilmore, Daniel Kopetzki, Ju Weon Lee, Zoltán Horváth, D. Tyler McQuade, Andreas Seidel-Morgenstern and Peter H. Seeberger  
Chemical Communications 2014 vol. 50(Issue 84) pp:12652-12655
Publication Date(Web):29 Aug 2014
DOI:10.1039/C4CC05098C
Described is a continuous, divergent synthesis system which is coupled to continuous purification and is capable of producing four anti-malarial APIs. The system is comprised of three linked reaction modules for photooxidation/cyclization, reduction, and derivatization. A fourth module couples the crude reaction stream with continuous purification to yield pure API.
Co-reporter:Dmitry B. Ushakov, Kerry Gilmore and Peter H. Seeberger  
Chemical Communications 2014 vol. 50(Issue 84) pp:12649-12651
Publication Date(Web):03 Sep 2014
DOI:10.1039/C4CC04932B
Tri- or tetrasubstituted α-cyanoepoxides can be rapidly prepared from unactivated amines and malononitrile or methyl cyanoacetate when singlet oxygen, produced in a continuous-flow photoreactor, serves as an oxidant and in situ peroxide source. The hydrogen peroxide generated in amine oxidation epoxidizes an electron deficient olefin intermediate, formed by deaminative Mannich coupling. The corresponding α,α-dicyano- or α-cyano-α-esterepoxides were obtained in good yields (43–82%).
Co-reporter:Jeyakumar Kandasamy, Frank Schuhmacher, Heung Sik Hahm, James C. Klein and Peter H. Seeberger  
Chemical Communications 2014 vol. 50(Issue 15) pp:1875-1877
Publication Date(Web):03 Jan 2014
DOI:10.1039/C3CC48860H
Dermatan sulfates are glycosaminoglycan polysaccharides that serve a multitude of biological roles as part of the extracellular matrix. Orthogonally protected D-galactosamine and L-iduronic acid building blocks and a photo-cleavable linker are instrumental for the automated synthesis of dermatan sulfate oligosaccharides. Conjugation-ready oligosaccharides were obtained in good yield.
Co-reporter:Mattan Hurevich and Peter H. Seeberger  
Chemical Communications 2014 vol. 50(Issue 15) pp:1851-1853
Publication Date(Web):17 Dec 2013
DOI:10.1039/C3CC48761J
Current strategies for the synthesis of glycopeptides require multiple manual synthetic steps. Here, we describe a synthesis concept that merges solid phase peptide and oligosaccharide syntheses and can be executed automatically using a single instrument.
Co-reporter:Mattan Hurevich, Jeyakumar Kandasamy, Bopanna M. Ponnappa, Mayeul Collot, Daniel Kopetzki, D. Tyler McQuade, and Peter H. Seeberger
Organic Letters 2014 Volume 16(Issue 6) pp:1794-1797
Publication Date(Web):March 11, 2014
DOI:10.1021/ol500530q
Photolabile linkers are an attractive alternative for solid-phase synthesis because they can be cleaved using light. However, irradiation in a classical batch photoreactor results in incomplete cleavage of the photolabile linkers. It is demonstrated that a continuous flow photoreactor is superior to a batch photoreactor for the cleavage of a linker from polystyrene resin.
Co-reporter:Chakkumkal Anish, Benjamin Schumann, Claney Lebev Pereira, Peter H. Seeberger
Chemistry & Biology 2014 Volume 21(Issue 1) pp:38-50
Publication Date(Web):16 January 2014
DOI:10.1016/j.chembiol.2014.01.002
Carbohydrate antigens have shown promise as important targets for developing effective vaccines and pathogen detection strategies. Modifying purified microbial glycans through synthetic routes or completely synthesizing antigenic motifs are attractive options to advance carbohydrate vaccine development. However, limited knowledge on structure-property correlates hampers the discovery of immunoprotective carbohydrate epitopes. Recent advancements in tools for glycan modification, high-throughput screening of biological samples, and 3D structural analysis may facilitate antigen discovery process. This review focuses on advances that accelerate carbohydrate-based vaccine development and various technologies that are driving these efforts. Herein we provide a critical overview of approaches and resources available for rational design of better carbohydrate antigens. Structurally defined and fully synthetic oligosaccharides, designed based on molecular understanding of antigen-antibody interactions, offer a promising alternative for developing future carbohydrate vaccines.
Co-reporter:Felix Broecker, Jonas Aretz, You Yang, Jonas Hanske, Xiaoqiang Guo, Anika Reinhardt, Annette Wahlbrink, Christoph Rademacher, Chakkumkal Anish, and Peter H. Seeberger
ACS Chemical Biology 2014 Volume 9(Issue 4) pp:867
Publication Date(Web):January 30, 2014
DOI:10.1021/cb400925k
Today, the process of selecting carbohydrate antigens as a basis for active vaccination and the generation of antibodies for therapeutic and diagnostic purposes is based on intuition combined with trial and error experiments. In efforts to establish a rational process for glycan epitope selection, we employed glycan array screening, surface plasmon resonance, and saturation transfer difference (STD)-NMR to elucidate the interactions between antibodies and glycans representing the Yersinia pestis lipopolysaccharide (LPS). A trisaccharide epitope of the LPS inner core glycan and different LPS-derived oligosaccharides from various Gram-negative bacteria were analyzed using this combination of techniques. The antibody-glycan interaction with a heptose substructure was determined at atomic-level detail. Antibodies specifically recognize the Y. pestis trisaccharide and some substructures with high affinity and specificity. No significant binding to LPS glycans from other bacteria was observed, which suggests that the epitopes for just one particular bacterial species can be identified. On the basis of these results we are beginning to understand the rules for structure-based design and selection of carbohydrate antigens.
Co-reporter:Kerry Gilmore, Stella Vukelić, D. Tyler McQuade, Beate Koksch, and Peter H. Seeberger
Organic Process Research & Development 2014 Volume 18(Issue 12) pp:1771-1776
Publication Date(Web):November 3, 2014
DOI:10.1021/op500310s
Most successful reactions carried out under continuous flow conditions mix homogeneous solutions yielding homogeneous products. Using solids is avoided to prevent pump and reactor clogging; even though solid reagents may often be the best choice for a given transformation. Here we demonstrate that by pumping aldehydes, ketones, or in situ formed imines through a specially formulated NaBH4 column results in efficient reductions. The column design and performance characteristics, along with substrate scope, are discussed.
Co-reporter:Kerry Gilmore
The Chemical Record 2014 Volume 14( Issue 3) pp:410-418
Publication Date(Web):
DOI:10.1002/tcr.201402035

Abstract

Due to the narrow width of tubing/reactors used, photochemistry performed in micro- and mesoflow systems is significantly more efficient than when performed in batch due to the Beer-Lambert Law. Owing to the constant removal of product and facility of flow chemical scalability, the degree of degradation observed is generally decreased and the productivity of photochemical processes is increased. In this Personal Account, we describe a wide range of photochemical transformations we have examined using both visible and UV light, covering cyclizations, intermolecular couplings, radical polymerizations, as well as singlet oxygen oxygenations.

Co-reporter:Dr. Ali Barov;Dr. Dan Grünstein;Dr. Ivalaya Apostolova;Dr. Ralph Buchert;Michel Roger; Dr. Winfried Brenner; Dr. Ulrich Abram; Dr. Peter H. Seeberger
ChemBioChem 2014 Volume 15( Issue 7) pp:986-994
Publication Date(Web):
DOI:10.1002/cbic.201400001

Abstract

A new tridentate bifunctional chelator, N-(-2-picolyl)(-4-hydroxy)(-3-amino)benzoic acid (PHAB), was designed to efficiently coordinate the [99mTc(CO)3]+ core and facilitate coupling reactions to biomolecules. The chelator can be procured in the form of the corresponding benzotriazole ester (PHAB-OBT), which can be stored and used as a bioconjugation kit. PHAB-OBT reacts with modified carbohydrates with high selectivity and efficiency in a single step in both aqueous and organic media. As is desirable for a kit, no complicated chemical bench work is required. Glycoconjugate postlabeling resulted in neutral radiolabeled glycans with high radiochemical yields. Prelabeling approaches were assessed by successive reaction of PHAB-OBT with the [99mTc(CO)3]+ core and a modified galactose model. The radiolabeled galactose was obtained in 84 % yield as defined by HPLC analysis. Biodistribution of the radioactive 99mTc-labeled chelator, as well as the glycoconjugates, were examined in mice. Noticeably different biodistribution patterns were observed that reflect trends in the uptake of carbohydrate analogues by various organs.

Co-reporter:Dr. Dmitry B. Ushakov;Dr. Kerry Gilmore;Dr. Daniel Kopetzki;Dr. D. Tyler McQuade;Dr. Peter H. Seeberger
Angewandte Chemie International Edition 2014 Volume 53( Issue 2) pp:557-561
Publication Date(Web):
DOI:10.1002/anie.201307778

Abstract

Primary and secondary amines can be rapidly and quantitatively oxidized to the corresponding imines by singlet oxygen. This reactive form of oxygen was produced using a variable-temperature continuous-flow LED-photoreactor with a catalytic amount of tetraphenylporphyrin as the sensitizer. α-Aminonitriles were obtained in good to excellent yields when trimethylsilyl cyanide served as an in situ imine trap. At 25°C, primary amines were found to undergo oxidative coupling prior to cyanide addition and yielded secondary α-aminonitriles. Primary α-aminonitriles were synthesized from the corresponding primary amines for the first time, by an oxidative Strecker reaction at –50 °C. This atom-economic and protecting-group-free pathway provides a route to racemic amino acids, which was exemplified by the synthesis of tert-leucine hydrochloride from neopentylamine.

Co-reporter:Dr. Dmitry B. Ushakov;Dr. Kerry Gilmore;Dr. Daniel Kopetzki;Dr. D. Tyler McQuade;Dr. Peter H. Seeberger
Angewandte Chemie 2014 Volume 126( Issue 2) pp:568-572
Publication Date(Web):
DOI:10.1002/ange.201307778

Abstract

Primäre und sekundäre Amine können mit Singulettsauerstoff schnell und quantitativ zu den entsprechenden Iminen oxidiert werden. Ein temperierbarer, LED-betriebener Durchflussphotoreaktor produziert in Gegenwart katalytischer Mengen Tetraphenylporphyrin als Sensibilisator die reaktive Form des Sauerstoffs. α-Aminonitrile konnten mit Trimethylsilylcyanid als In-situ-Abfangreagens in guten bis ausgezeichneten Ausbeuten hergestellt werden. Primäre Amine reagierten bei 25 °C aufgrund oxidativer Kupplung vor der Cyanidaddition zu den sekundären α-Aminonitrilen. Überraschenderweise konnten erstmals primäre α-Aminonitrile synthetisiert werden, indem die oxidative Strecker-Reaktion bei −50 °C durchgeführt wurde. Dieser Prozess kann zur atomökonomischen und schutzgruppenfreien Herstellung racemischer Aminosäuren genutzt werden, was am Beispiel der Synthese von tert-Leucinhydrochlorid aus Neopentylamin gezeigt wird.

Co-reporter:You Yang ; Shunsuke Oishi ; Christopher E. Martin
Journal of the American Chemical Society 2013 Volume 135(Issue 16) pp:6262-6271
Publication Date(Web):March 24, 2013
DOI:10.1021/ja401164s
Lipopolysaccharide (LPS) is a potent virulence factor of pathogenic Gram-negative bacteria. To better understand the role of LPS in host–pathogen interactions and to elucidate the antigenic and immunogenic properties of LPS inner core region, a collection of well-defined l-glycero-d-manno-heptose (Hep) and 3-deoxy-α-d-manno-oct-2-ulosonic acid (Kdo)-containing inner core oligosaccharides is required. To address this need, we developed a diversity-oriented approach based on a common orthogonal protected disaccharide Hep-Kdo. Utilizing this new approach, we synthesized a range of LPS inner core oligosaccharides from a variety of pathogenic bacteria including Y. pestis, H. influenzae, and Proteus that cause plague, meningitis, and severe wound infections, respectively. Rapid access to these highly branched core oligosaccharides relied on elaboration of the disaccharide Hep-Kdo core as basis for the elongation with various flexible modules including unique Hep and 4-amino-4-deoxy-β-l-arabinose (Ara4N) monosaccharides and branched Hep-Hep disaccharides. A regio- and stereoselective glycosylation of Kdo 7,8-diol was key to selective installation of the Ara4N moiety at the 8-hydroxyl group of Kdo moiety of the Hep-Kdo disaccharide. The structure of the LPS inner core oligosaccharides was confirmed by comparison of 1H NMR spectra of synthetic antigens and isolated fragments. These synthetic LPS core oligosaccharides can be covalently bound to carrier proteins via the reducing end pentyl amine linker, to explore their antigenic and immunogenic properties as well as potential applications such as diagnostic tools and vaccines.
Co-reporter:Christopher E. Martin ; Felix Broecker ; Matthias A. Oberli ; Julia Komor ; Jochen Mattner ; Chakkumkal Anish
Journal of the American Chemical Society 2013 Volume 135(Issue 26) pp:9713-9722
Publication Date(Web):May 31, 2013
DOI:10.1021/ja401410y
Clostridium difficile is the cause of emerging nosocomial infections that result in abundant morbidity and mortality worldwide. Thus, the development of a vaccine to kill the bacteria to prevent this disease is highly desirable. Several recently identified bacterial surface glycans, such as PS-I and PS-II, are promising vaccine candidates to preclude C. difficile infection. To circumvent difficulties with the generation of natural PS-I due to its low expression levels in bacterial cultures, improved chemical synthesis protocols for the pentasaccharide repeating unit of PS-I and oligosaccharide substructures were utilized to produce large quantities of well-defined PS-I related glycans. The analysis of stool and serum samples obtained from C. difficile patients using glycan microarrays of synthetic oligosaccharide epitopes revealed humoral immune responses to the PS-I related glycan epitopes. Two different vaccine candidates were evaluated in the mouse model. A synthetic PS-I repeating unit CRM197 conjugate was immunogenic in mice and induced immunoglobulin class switching as well as affinity maturation. Microarray screening employing PS-I repeating unit substructures revealed the disaccharide Rha-(1→3)-Glc as a minimal epitope. A CRM197-Rha-(1→3)-Glc disaccharide conjugate was able to elicit antibodies recognizing the C. difficile PS-I pentasaccharide. We herein demonstrate that glycan microarrays exposing defined oligosaccharide epitopes help to determine the minimal immunogenic epitopes of complex oligosaccharide antigens. The synthetic PS-I pentasaccharide repeating unit as well as the Rha-(1→3)-Glc disaccharide are promising novel vaccine candidates against C. difficile that are currently in preclinical evaluation.
Co-reporter:Christopher E. Martin, Felix Broecker, Steffen Eller, Matthias A. Oberli, Chakkumkal Anish, Claney L. Pereira and Peter H. Seeberger  
Chemical Communications 2013 vol. 49(Issue 64) pp:7159-7161
Publication Date(Web):18 Jun 2013
DOI:10.1039/C3CC43545H
Clostridium difficile is a leading cause of severe nosocomial infections. Cell-surface carbohydrate antigens are promising vaccine candidates. Here we report the first total synthesis of oligomers of the lipoteichoic acid antigen repeating unit. Synthetic glycan microarrays revealed anti-glycan antibodies in the blood of patients that help to define epitopes for vaccine development.
Co-reporter:Jeyakumar Kandasamy, Mattan Hurevich and Peter H. Seeberger  
Chemical Communications 2013 vol. 49(Issue 40) pp:4453-4455
Publication Date(Web):22 Jan 2013
DOI:10.1039/C3CC00042G
Automated solid phase synthesis enables rapid access to the linear and branched arabinofuranoside oligosaccharides. A simple purification step is sufficient to provide the conjugation ready oligosaccharides in good yield.
Co-reporter:Chakkumkal Anish, Christopher E. Martin, Annette Wahlbrink, Christian Bogdan, Pantelis Ntais, Maria Antoniou, and Peter H. Seeberger
ACS Chemical Biology 2013 Volume 8(Issue 11) pp:2412
Publication Date(Web):September 4, 2013
DOI:10.1021/cb400602k
Detection and quantification of pathogen-derived antigenic structures is a key method for the initial diagnosis and follow-up of various infectious diseases. Complex parasitic diseases such as leishmaniasis require highly sensitive and specific tests prior to treatment with potentially toxic drugs. To investigate the diagnostic potential of cell surface glycans found on Leishmania parasites, we identified diagnostically relevant glycan epitopes and used synthetic glycan microarrays to screen sera from infected humans and dogs. On the basis of the screening results, we selected a tetrasaccharide to generate anti-glycan antibodies. The corresponding tetrasaccharide-carrier protein conjugate was immunogenic in mice, and sera obtained from immunized mice specifically detected the Leishmania parasite. These results demonstrate how synthetic glycan arrays, in combination with immunological methods, help to identify promising carbohydrate antigens for pathogen detection.
Co-reporter:Felix Wojcik;Dr. Alexer G. O'Brien;Sebastian Götze;Dr. Peter H. Seeberger;Dr. Laura Hartmann
Chemistry - A European Journal 2013 Volume 19( Issue 9) pp:3090-3098
Publication Date(Web):
DOI:10.1002/chem.201203927

Abstract

Poly/oligo(amidoamine)s (PAAs) have recently been recognised for their potential as well-defined scaffolds for multiple carbohydrate presentation and as multivalent ligands. Herein, we report two complimentary strategies for the preparation of such sequence-defined carbohydrate-functionalised PAAs that use photochemical thiolene coupling (TEC) as an alternative to the established azide–alkyne cycloaddition (“click”) reaction. In the first approach, PAAs that contained multiple olefins were synthesised on a solid support from a new building block and subsequent conjugation with unprotected thio-carbohydrates. Alternatively, a pre-functionalised building block was prepared by using TEC and assembled on a solid support to provide a carbohydrate-functionalised PAA. Both methods rely on the use of a continuous flow photoreactor for the TEC reactions. This system is highly efficient, owing to its short path length, and requires no additional radical initiator. Performing the reactions at 254 nm in Teflon AF-2400 tubing provides a highly efficient TEC procedure for carbohydrate conjugation, as demonstrated in the reactions of O-allyl glycosides with thiols. This method allowed the complete functionalisation of all of the reactive sites on the PAA backbone in a single step, thereby obtaining a defined homogeneous sequence. Furthermore, reaction at 366 nm in FEP tubing in the flow reactor enabled the large-scale synthesis of an fluorenylmethyloxycarbonyl (Fmoc)-protected glycosylated building block, which was shown to be suitable for solid-phase synthesis and will also allow heterogeneous sequence control of different carbohydrates along the oligomeric backbone. These developments enable the synthesis of sequence-defined carbohydrate-functionalised PAAs with potential biological applications.

Co-reporter:Oliviana Calin;Dr. Steffen Eller;Heung Sik Hahm ;Dr. Peter H. Seeberger
Chemistry - A European Journal 2013 Volume 19( Issue 12) pp:3995-4002
Publication Date(Web):
DOI:10.1002/chem.201204394

Abstract

The first total synthesis of the O-antigen pentasaccharide repeating unit from Gram-negative bacteria Escherichia coli O111 was achieved starting from four monosaccharide building blocks. Key to the synthetic approach was a bis-glycosylation reaction to combine trisaccharide 10 and colitose 5. The colitose building block (5) was obtained de novo from non-carbohydrate precursors. The pentasaccharide was equipped at the reducing end with an amino spacer to provide a handle for subsequent conjugation to a carrier protein in anticipation of immunological studies.

Co-reporter:Dr. David C. Kennedy;Dan Grünstein;Dr. Chian-Hui Lai;Dr. Peter H. Seeberger
Chemistry - A European Journal 2013 Volume 19( Issue 12) pp:3794-3800
Publication Date(Web):
DOI:10.1002/chem.201204155

Abstract

Carbohydrates on cell surfaces are critical components of the extracellular landscape and contribute to cell signalling, motility, adhesion and recognition. Multivalent effects are essential to these interactions that are inherently weak. Carbohydrate-functionalised surfaces meet an important need for studying the multivalent interactions between carbohydrates and other biomolecules. Innovations in nanomaterials are revolutionising how these carbohydrate interfaces are studied and underscore their importance in the cosmos of biochemical interactions.

Co-reporter:Dr. Daniel Kopetzki;Dr. François Lévesque;Dr. Peter H. Seeberger
Chemistry - A European Journal 2013 Volume 19( Issue 17) pp:5450-5456
Publication Date(Web):
DOI:10.1002/chem.201204558

Abstract

Isolation of the most effective antimalarial drug, artemisinin, from the plant sweet wormwood, does not yield sufficient quantities to provide the more than 300 million treatments needed each year. The high prices for the drug are a consequence of the unreliable and often insufficient supply of artemisinin. Large quantities of ineffective fake drugs find a market in Africa. Semisynthesis of artemisinin from inactive biological precursors, either dihydroartemisinic acid (DHAA) or artemisinic acid, offers a potentially attractive route to increase artemisinin production. Conversion of the plant waste product, DHAA, into artemisinin requires use of photochemically generated singlet oxygen at large scale. We met this challenge by developing a one-pot photochemical continuous-flow process for the semisynthesis of artemisinin from DHAA that yields 65 % product. Careful optimization resulted in a process characterized by short residence times. A method to extract DHAA from the mother liquor accumulated during commercial artemisinin extractions, a material that is currently discarded as waste, is also reported. The synthetic continuous-flow process described here is an effective means to supplement the limited availability of artemisinin and ensure increased supplies of the drug for those in need.

Co-reporter:Oliviana Calin;Dr. Steffen Eller;Dr. Peter H. Seeberger
Angewandte Chemie 2013 Volume 125( Issue 22) pp:5974-5977
Publication Date(Web):
DOI:10.1002/ange.201210176
Co-reporter:Dr. Steffen Eller;Dr. Mayeul Collot;Dr. Jian Yin;Heung Sik Hahm;Dr. Peter H. Seeberger
Angewandte Chemie 2013 Volume 125( Issue 22) pp:5970-5973
Publication Date(Web):
DOI:10.1002/ange.201210132
Co-reporter:Dr. Chakkumkal Anish;Dr. Xiaoqiang Guo;Annette Wahlbrink;Dr. Peter H. Seeberger
Angewandte Chemie 2013 Volume 125( Issue 36) pp:9702-9706
Publication Date(Web):
DOI:10.1002/ange.201301633
Co-reporter:Oliviana Calin;Dr. Steffen Eller;Dr. Peter H. Seeberger
Angewandte Chemie International Edition 2013 Volume 52( Issue 22) pp:5862-5865
Publication Date(Web):
DOI:10.1002/anie.201210176
Co-reporter:Dr. Steffen Eller;Dr. Mayeul Collot;Dr. Jian Yin;Heung Sik Hahm;Dr. Peter H. Seeberger
Angewandte Chemie International Edition 2013 Volume 52( Issue 22) pp:5858-5861
Publication Date(Web):
DOI:10.1002/anie.201210132
Co-reporter:Dr. Chakkumkal Anish;Dr. Xiaoqiang Guo;Annette Wahlbrink;Dr. Peter H. Seeberger
Angewandte Chemie International Edition 2013 Volume 52( Issue 36) pp:9524-9528
Publication Date(Web):
DOI:10.1002/anie.201301633
Co-reporter:Lenz Kröck, Davide Esposito, Bastien Castagner, Cheng-Chung Wang, Pascal Bindschädler and Peter H. Seeberger  
Chemical Science 2012 vol. 3(Issue 5) pp:1617-1622
Publication Date(Web):20 Feb 2012
DOI:10.1039/C2SC00940D
Understanding the structure–function relationship of carbohydrates in biological systems is a major challenge. Such investigations require fast and reliable access to structurally-defined oligosaccharides. To date, oligosaccharide synthesis has been considered technically difficult and only parts of the synthetic process have been automated using solution and solid-phase techniques. Here, we describe a versatile platform integrating a new synthesis strategy and a fully-automated oligosaccharide synthesizer. Structurally diverse conjugation-ready oligosaccharides can be generated for the creation of glycoconjugates and microarrays. Biologically-significant oligosaccharides of increasing length, structural complexity, and chemical diversity were produced, including glycans found on the surfaces of pathogenic bacteria, and those with integral roles in inflammatory and immune responses.
Co-reporter:Farhan R. Bou-Hamdan and Peter H. Seeberger  
Chemical Science 2012 vol. 3(Issue 5) pp:1612-1616
Publication Date(Web):09 Feb 2012
DOI:10.1039/C2SC01016J
The first application of visible-light-mediated synthetic photochemistry in continuous flow is described. Using an operationally simple photoreactor design, several Ru(bpy)32+-catalyzed transformations were performed with 10–50 fold rate enhancement over the corresponding batch methods. In the process, lower catalyst loadings were needed to produce the desired products in excellent yields within residence times between 1 and 30 min, while minimal waste byproducts were formed. The process is readily scalable and provides access to large quantities of product in relatively short time.
Co-reporter:You Yang, Christopher E. Martin and Peter H. Seeberger  
Chemical Science 2012 vol. 3(Issue 3) pp:896-899
Publication Date(Web):08 Dec 2011
DOI:10.1039/C1SC00804H
The first total synthesis of the core tetrasaccharide α-GlcNAc-(1 → 2)-α-Hep-(1 → 3)-α-Hep-(1 → 5)-α-Kdo of Neisseria meningitidis LPS is achieved in a convergent and stereocontrolled [2 + 2] approach, whereby heptose building blocks obtained by de novo synthesis were fine-tuned for the effective assembly of the 1 → 5 linked Hep-Kdo disaccharide. The synthetic strategy incorporates an α-linked spacer at the reducing end of the tetrasaccharide for use as a handle during subsequent conjugation to a carrier protein.
Co-reporter:Daniel Kolarich, Bernd Lepenies, Peter H Seeberger
Current Opinion in Chemical Biology 2012 Volume 16(1–2) pp:214-220
Publication Date(Web):April 2012
DOI:10.1016/j.cbpa.2011.12.006
Glycomics and glycoproteomics have become indispensible tools in the study of glycoconjugates. Mass spectrometry based methods are standardly used to study the proteome and/or glycome and these approaches are capable of providing both, qualitative and quantitative information using top down techniques. The human immune system marks a particular area of interest for glycomics and glycoproteomics research since a large number of key proteins in innate and adaptive immunity are glycoproteins. In numerous examples, the crucial influence of glycosylation on critical steps such as receptor interaction and binding has been demonstrated. In this review, we focus on different glycomics and glycoproteomics approaches and their application for studying protein glycosylation in the immune system.Highlights► Glycomics by PGC LC ESI MS enables isobaric glycan separation. ► Modifications in the N-glycans can completely reverse IgG function. ► Glycoproteomics investigates glycan structures in a site-specific manner. ► Glycomics and glycoproteomics are key technologies for probing glycoprotein function. ► Glycan structures on immune cells interact with lectins (C-type lectins, galectins, siglecs, among others).
Co-reporter:Pierre Stallforth, Stefan Matthies, Alexander Adibekian, Dennis G. Gillingham, Donald Hilvert and Peter H. Seeberger  
Chemical Communications 2012 vol. 48(Issue 98) pp:11987-11989
Publication Date(Web):24 Oct 2012
DOI:10.1039/C2CC37305J
A chemoenzymatic synthesis of sialic acid from inexpensive N-acetyl-D-glucosamine is described. In a three-step Wittig–protection–ozonolysis strategy manno-configured aldehydes are obtained. Treatment with oxaloacetate in the presence of macrophomate synthase affords the signature α-keto-γ-hydroxy acid moiety with high diastereoselectivity.
Co-reporter:Daniele Leonori and Peter H. Seeberger
Organic Letters 2012 Volume 14(Issue 18) pp:4954-4957
Publication Date(Web):September 6, 2012
DOI:10.1021/ol3023227
The cell-surface glycans on bacteria contain many monosaccharides that cannot be obtained by isolation from natural sources. Availability of differentially protected monosaccharides is therefore often limiting access to potential oligosaccharide vaccine antigens. d-Fucosamine, d-bacillosamine, and d-xylo-2,6-deoxy-4-ketohexosamine building blocks were prepared via a divergent de novo synthesis from l-Garner aldehyde. The route relies on a chelation-control assisted organometallic addition and an anti-selective dihydroxylation reaction.
Co-reporter:Giuliano Bellapadrona, Alexander B. Tesler, Dan Grünstein, Laila H. Hossain, Raghavendra Kikkeri, Peter H. Seeberger, Alexander Vaskevich, and Israel Rubinstein
Analytical Chemistry 2012 Volume 84(Issue 1) pp:232
Publication Date(Web):December 7, 2011
DOI:10.1021/ac202363t
Noble metal nanostructures supporting localized surface plasmons (SPs) have been widely applied to chemical and biological sensing. Changes in the refractive index near the nanostructures affect the SP extinction band, making localized surface plasmon resonance (LSPR) spectroscopy a convenient tool for studying biological interactions. Carbohydrate–protein interactions are of major importance in living organisms; their study is crucial for understanding of basic biological processes and for the construction of biosensors for diagnostics and drug development. Here LSPR transducers based on gold island films prepared by evaporation on glass and annealing were optimized for monitoring the specific interaction between Concanavalin A (Con A) and D-(+)-mannose. The sugar was modified with a PEG-thiol linker and immobilized on the Au islands. Sensing assays were performed under stationary and flow conditions, the latter providing kinetic parameters for protein binding and dissociation. Ellipsometry and Fourier transform-infrared (FT-IR) data, as well as scanning electron microscopy (SEM) imaging of fixated and stained samples, furnished independent evidence for the protein-sugar recognition. Enhanced response and visual detection of protein binding was demonstrated using Au nanoparticles stabilized with the linker-modified mannose molecules. Mannose-coated transducers display an excellent selectivity toward Con A in the presence of a large excess of bovine serum albumin (BSA).
Co-reporter:Oliviana Calin, Rajan Pragani, and Peter H. Seeberger
The Journal of Organic Chemistry 2012 Volume 77(Issue 2) pp:870-877
Publication Date(Web):December 12, 2011
DOI:10.1021/jo201883k
A divergent, practical, and efficient de novo synthesis of fully functionalized l-colitose (3,6-dideoxy-l-galactose), 2-epi-colitose (3,6-dideoxy-l-talose), and l-rhodinose (2,3,6-trideoxy-l-galactose) building blocks has been achieved using inexpensive, commercially available (S)-ethyl lactate as the starting material. The routes center around a diastereoselective Cram-chelated allylation that provides a common homoallylic alcohol intermediate. Oxidation of this common intermediate finally resulted in the synthesis of the three monosaccharide building blocks.
Co-reporter:Dr. François Lévesque;Dr. Peter H. Seeberger
Angewandte Chemie International Edition 2012 Volume 51( Issue 7) pp:1706-1709
Publication Date(Web):
DOI:10.1002/anie.201107446
Co-reporter:Dr. Alexer G. O'Brien;Zoltán Horváth;Dr. François Lévesque;Dr. Ju Weon Lee;Dr. Andreas Seidel-Morgenstern;Dr. Peter H. Seeberger
Angewandte Chemie International Edition 2012 Volume 51( Issue 28) pp:7028-7030
Publication Date(Web):
DOI:10.1002/anie.201202795
Co-reporter:Dr. François Lévesque;Dr. Peter H. Seeberger
Angewandte Chemie 2012 Volume 124( Issue 7) pp:1738-1741
Publication Date(Web):
DOI:10.1002/ange.201107446
Co-reporter:Dr. Alexer G. O'Brien;Zoltán Horváth;Dr. François Lévesque;Dr. Ju Weon Lee;Dr. Andreas Seidel-Morgenstern;Dr. Peter H. Seeberger
Angewandte Chemie 2012 Volume 124( Issue 28) pp:7134-7137
Publication Date(Web):
DOI:10.1002/ange.201202795
Co-reporter:Paola Laurino, Raghavendra Kikkeri, Nahid Azzouz, and Peter H. Seeberger
Nano Letters 2011 Volume 11(Issue 1) pp:73-78
Publication Date(Web):November 29, 2010
DOI:10.1021/nl102821f
Biocompatible glyco-dendronized poly-l-lysine (PLL) polymers carry either three or nine mannose- or galactose-bearing dendrons that selectively bind, and thus can be used to detect, bacteria. Central to the synthesis of glyco-dendronized polymers was the development of a continuous flow [2 + 2] photocycloaddition reaction to connect the dendrons and PLL. Glycodendronized polymers cluster bacteria by binding to cell-surface carbohydrate receptors and thereby result in an easy read-out using microscopic analyses.
Co-reporter:Dan Grünstein ; Maha Maglinao ; Raghavendra Kikkeri ; Mayeul Collot ; Konstantin Barylyuk ; Bernd Lepenies ; Faustin Kamena ; Renato Zenobi
Journal of the American Chemical Society 2011 Volume 133(Issue 35) pp:13957-13966
Publication Date(Web):July 26, 2011
DOI:10.1021/ja2036767
Carbohydrates are integral to biological signaling networks and cell–cell interactions, yet the detection of discrete carbohydrate–lectin interactions remains difficult since binding is generally weak. A strategy to overcome this problem is to create multivalent sensors, where the avidity rather than the affinity of the interaction is important. Here we describe the development of a series of multivalent sensors that self-assemble via hydrophobic supramolecular interactions. The multivalent sensors are comprised of a fluorescent ruthenium(II) core surrounded by a heptamannosylated β-cyclodextrin scaffold. Two additional series of complexes were synthesized as proof-of-principle for supramolecular self-assembly, the fluorescent core alone and the core plus β-cyclodextrin. Spectroscopic analyses confirmed that the three mannosylated sensors displayed 14, 28, and 42 sugar units, respectively. Each complex adopted original and unique spatial arrangements. The sensors were used to investigate the influence of carbohydrate spatial arrangement and clustering on the mechanistic and qualitative properties of lectin binding. Simple visualization of binding between a fluorescent, multivalent mannose complex and the Escherichia coli strain ORN178 that possesses mannose-specific receptor sites illustrates the potential for these complexes as biosensors.
Co-reporter:Alexander Adibekian, Pierre Stallforth, Marie-Lyn Hecht, Daniel B. Werz, Pascal Gagneux and Peter H. Seeberger  
Chemical Science 2011 vol. 2(Issue 2) pp:337-344
Publication Date(Web):05 Nov 2010
DOI:10.1039/C0SC00322K
A comparative analysis of bacterial and mammalian glycomes based on the statistical analysis of two major carbohydrate databases, Bacterial CarbohydrateStructure Data Base (BCSDB) and GLYCOSCIENCES.de (GS), is presented. An in-depth comparison of these two glycomes reveals both striking differences and unexpected similarities. Within the prokaryotic kingdom, we focus on the glycomes of seven classes of pathogenic bacteria with respect to (i) their most abundant monosaccharide units; (ii) disaccharide pairs; (iii) carbohydrate modifications; (iv) occurrence and use of sialic acids; and (v) class-specific monosaccharides. The aim of this work is to gain insights into unique carbohydrate patterns in bacteria. Data interpretation reveals significant trends in the composition of specific carbohydrate classes as result of evolution-driven structural adaptations of bacterial pathogens and symbionts to their mammalian hosts. The differences are discussed in light of their value for biomedical applications, such as the targeting of unique glycosyl transferases, vaccine development, and devising novel diagnostic tools.
Co-reporter:Christopher E. Martin, Markus W. Weishaupt and Peter H. Seeberger  
Chemical Communications 2011 vol. 47(Issue 37) pp:10260-10262
Publication Date(Web):18 Aug 2011
DOI:10.1039/C1CC13614C
Clostridium difficile strain ribotype 027 is a hypervirulent pathogen that is responsible for recent, severe outbreaks of serious nosocomial infections. As a foundation for the development of a preventative carbohydrate-based vaccine, we have synthesized a pentasaccharide cell wall repeating unit from PS-I unique to this strain, by the linear assembly of four monosaccharide building blocks.
Co-reporter:Alexander G. O'Brien, François Lévesque and Peter H. Seeberger  
Chemical Communications 2011 vol. 47(Issue 9) pp:2688-2690
Publication Date(Web):20 Dec 2010
DOI:10.1039/C0CC04481D
An efficient, safe and scalable procedure for the continuous flow thermolysis of azidoacrylates to yield indoles has been developed and was applied to the synthesis of related heterocycles. The scalability of the process was demonstrated in the continuous flow synthesis of a precursor to the DAAO inhibitor 4H-furo[3,2-b]pyrrole-5-carboxylic acid.
Co-reporter:T. Horlacher, C. Noti, J. L. de Paz, P. Bindschädler, M.-L. Hecht, D. F. Smith, M. N. Fukuda, and P. H. Seeberger
Biochemistry 2011 Volume 50(Issue 13) pp:
Publication Date(Web):March 3, 2011
DOI:10.1021/bi101121a
Annexin A1 is a multifunctional, calcium-dependent phospholipid binding protein involved in a host of processes including inflammation, regulation of neuroendocrine signaling, apoptosis, and membrane trafficking. Binding of annexin A1 to glycans has been implicated in cell attachment and modulation of annexin A1 function. A detailed characterization of the glycan binding preferences of annexin A1 using carbohydrate microarrays and surface plasmon resonance served as a starting point to understand the role of glycan binding in annexin A1 function. Glycan array analysis identified annexin A1 binding to a series of sulfated oligosaccharides and revealed for the first time that annexin A1 binds to sulfated non-glycosaminoglycan carbohydrates. Using heparin/heparan sulfate microarrays, highly sulfated heparan sulfate/heparin were identified as preferred ligands of annexin A1. Binding of annexin A1 to heparin/heparan sulfate is calcium- but not magnesium-dependent. An in-depth structure−activity relationship of annexin A1−heparan sulfate interactions was established using chemically defined sugars. For the first time, a calcium-dependent heparin binding protein was characterized with such an approach. N-Sulfation and 2-O-sulfation were identified as particularly important for binding.
Co-reporter:Kathrin Gruber, Tim Horlacher, Riccardo Castelli, Andreas Mader, Peter H. Seeberger, and Bianca A. Hermann
ACS Nano 2011 Volume 5(Issue 5) pp:3670
Publication Date(Web):March 9, 2011
DOI:10.1021/nn103626q
Advances in carbohydrate sequencing technologies have revealed the tremendous complexity of the glycome. This complexity reflects the structural and chemical diversity of carbohydrates and is greater than that of proteins and oligonucleotides. The next step in understanding the biological function of carbohydrates requires the identification and quantification of carbohydrate interactions with other biomolecules, in particular, with proteins. To this end, we have developed a cantilever array biosensor with a self-assembling carbohydrate-based sensing layer that selectively and sensitively detects carbohydrate−protein binding interactions. Specifically, we examined binding of mannosides and the protein cyanovirin-N, which binds and blocks the human immunodeficiency virus (HIV). Cyanovirin-N binding to immobilized oligomannosides on the cantilever resulted in mechanical surface stress that is transduced into a mechanical force and cantilever bending. The degree and duration of cantilever deflection correlates with the interaction’s strength, and comparative binding experiments reveal molecular binding preferences. This study establishes that carbohydrate-based cantilever biosensors are a robust, label-free, and scalable means to analyze carbohydrate−protein interactions and to detect picomolar concentrations of carbohydrate-binding proteins.Keywords: biosensors; cantilever array sensors; cyanovirin-N; glycomics; nanomechanics
Co-reporter:Dr. Mark K. Schlegel;Julia Hütter;Magdalena Eriksson;Dr. Bernd Lepenies; Dr. Peter H. Seeberger
ChemBioChem 2011 Volume 12( Issue 18) pp:2791-2800
Publication Date(Web):
DOI:10.1002/cbic.201100511

Abstract

A new method for the spatially defined alignment of carbohydrates on a duplex DNA scaffold is presented. The use of an N-hydroxysuccinimide (NHS)-ester phosphoramidite along with carbohydrates containing an alkylamine linker allows for on-column labeling during solid-phase oligonucleotide synthesis. This modification method during solid-phase synthesis only requires the use of minimal amounts of complex carbohydrates. The covalently attached carbohydrates are presented in the major groove of the B-form duplex DNA as potential substrates for murine type II C-type lectin receptors mMGL1 and mMGL2. CD spectroscopy and thermal melting revealed only minimal disturbance of the overall helical structure. Surface plasmon resonance and cellular uptake studies with bone-marrow-derived dendritic cells were used to assess the capability of these carbohydrate-modified duplexes to bind to mMGL receptors.

Co-reporter:Rajan Pragani
Journal of the American Chemical Society 2010 Volume 133(Issue 1) pp:102-107
Publication Date(Web):December 10, 2010
DOI:10.1021/ja1087375
Nearly all bacteria capsular polysaccharides are T-cell-independent antigens that do not promote immunoglobulin class switching from IgM to IgG nor memory responses. In contrast, zwitterionic polysaccharides activate T-cell-dependent immune responses by major histocompatability complex class II presentation, a mechanism previously believed to be reserved for peptidic antigens. The best studied zwitterionic polysaccharide, polysaccharide A1 (PS A1) is found on the capsule of the commensal bacteria Bacteroides fragilis. Its potent immunomodulatory properties have been linked to postoperative intra-abdominal abscess formation. Here, we report the synthesis of the PS A1 tetrasaccharide repeating unit (2) as a tool to investigate the biological role of this polysaccharide. A modular synthetic strategy originating from the reducing end of the PS A1 repeating unit was unsuccessful and illustrated the limitations of glycosylation reactions between highly armed glycosylating agents and poor nucleophiles. Thus, a [3 + 1] glycosylation relying on trisaccharide 5 and pyruvalated galactose 6 was used to complete the first total synthesis of the PS A1 repeating unit (2).
Co-reporter:Rajan Pragani, Pierre Stallforth and Peter H. Seeberger
Organic Letters 2010 Volume 12(Issue 7) pp:1624-1627
Publication Date(Web):March 2, 2010
DOI:10.1021/ol1003912
Zwitterionic polysaccharides (ZPSs) are potent T-cell activators that naturally occur on the cell surface of bacteria and show potential as immunostimulatory agents. An unusual, yet important component of many ZPSs is 2-acetamido-4-amino-2,4,6-trideoxy-d-galactose (AAT). AAT building block 2 was prepared via a de novo synthesis from N-Cbz-l-threonine 5. Furthermore, building block 2 was used to synthesize disaccharide 15 that constitutes a fragment of zwitterionic polysaccharide A1 (PS A1) found in Bacteroides fragilis.
Co-reporter:Takafumi Ohara, Alexander Adibekian, Davide Esposito, Pierre Stallforth and Peter H. Seeberger  
Chemical Communications 2010 vol. 46(Issue 23) pp:4106-4108
Publication Date(Web):07 May 2010
DOI:10.1039/C000784F
A short and enantioselective de novo synthesis of an L-glycero-D-manno-heptose building block for the total synthesis of a Yersinia pestis cell wall polysaccharide is described.
Co-reporter:Raghavendra Kikkeri, Xinyu Liu, Alexander Adibekian, Yu-Hsuan Tsai and Peter H. Seeberger  
Chemical Communications 2010 vol. 46(Issue 13) pp:2197-2199
Publication Date(Web):24 Feb 2010
DOI:10.1039/B925113H
A facile and flexible approach for the preparation of Ru(II) complexes containing different carbohydrates based on the Cu(II)-catalyzed Huisgen-[3+2] cycloaddition is described.
Co-reporter:Gonçalo J. L. Bernardes, Raghavendra Kikkeri, Maha Maglinao, Paola Laurino, Mayeul Collot, Sung You Hong, Bernd Lepenies and Peter H. Seeberger  
Organic & Biomolecular Chemistry 2010 vol. 8(Issue 21) pp:4987-4996
Publication Date(Web):02 Sep 2010
DOI:10.1039/C0OB00372G
Targeting glycan-binding receptors is an attractive strategy for cell-specific drug and gene delivery. The C-type lectin asialoglycoprotein receptor (ASGPR) is particularly suitable for liver-specific delivery due to its exclusive expression by parenchymal hepatocytes. In this study, we designed and developed an efficient synthesis of carbohydrate-functionalized β-cyclodextrins (βCDs) and liposomes for hepatocyte-specific delivery. For targeting of ASGPR, rhodamine B-loaded βCDs were functionalized with glycodendrimers. Liposomes were equipped with synthetic glycolipids containing a terminal D-GalNAc residue to mediate binding to ASGPR. Uptake studies in the human hepatocellular carcinoma cell line HepG2 demonstrated that βCDs and liposomes displaying terminal D-Gal/D-GalNAc residues were preferentially endocytosed. In contrast, uptake of βCDs and liposomes with terminal D-Man or D-GlcNAc residues was markedly reduced. The D-Gal/D-GalNAc-functionalized βCDs and liposomes presented here enable hepatocyte-specific targeting. Gal-functionalized βCDs are efficient molecular carriers to deliver doxorubicin in vitro into hepatocytes and induce apoptosis.
Co-reporter:Pascal Bindschädler, Alexander Adibekian, Dan Grünstein, Peter H. Seeberger
Carbohydrate Research 2010 Volume 345(Issue 7) pp:948-955
Publication Date(Web):7 May 2010
DOI:10.1016/j.carres.2010.02.004
A divergent de novo synthesis of six differentially protected l-iduronic acid thioglycosides from a common advanced precursor is described. The key step of this synthetic sequence is the stereoselective elongation of dithioacetal protected C5-dialdehyde 11 via a highly diastereoselective MgBr2·OEt2-mediated cyanation. Orthogonally protected l-iduronic acid building blocks obtained by this synthesis are expected to facilitate access to differentially sulfated heparins for microarray-based structure–activity relationship studies.
Co-reporter:Tim Horlacher  Dr.;Matthias A. Oberli  Dr.;Daniel B. Werz  Dr.;Lenz Kröck  Dr.;Simone Bufali Dr.;Rashmi Mishra Dr.;Jens Sobek Dr.;Kai Simons Dr.;Mitsuomi Hirashima Dr.;Toshiro Niki Dr. Dr.
ChemBioChem 2010 Volume 11( Issue 11) pp:1563-1573
Publication Date(Web):
DOI:10.1002/cbic.201000020

Abstract

Galectins are a class of carbohydrate-binding proteins named for their galactose-binding preference and are involved in a host of processes ranging from homeostasis of organisms to immune responses. As a first step towards correlating the carbohydrate-binding preferences of the different galectins with their biological functions, we determined carbohydrate recognition fine-specificities of galectins with the aid of carbohydrate microarrays. A focused set of oligosaccharides considered relevant to galectins was prepared by chemical synthesis. Structure–activity relationships for galectin–sugar interactions were determined, and these helped in the establishment of redundant and specific galectin actions by comparison of binding preferences. Distinct glycosylations on the basic lactosyl motifs proved to be key to galectin binding regulation—and therefore galectin action—as either high-affinity ligands are produced or binding is blocked. High-affinity ligands such as the blood group antigens that presumably mediate particular functions were identified.

Co-reporter:Raghavendra Kikkeri, Faustin Kamena, Tarkeshwar Gupta, Laila H. Hossain, Siwarutt Boonyarattanakalin, Ganna Gorodyska, Eva Beurer, Géraldine Coullerez, Marcus Textor and Peter H. Seeberger
Langmuir 2010 Volume 26(Issue 3) pp:1520-1523
Publication Date(Web):December 1, 2009
DOI:10.1021/la9038792
We describe a novel platform on which to study carbohydrate−protein interactions based on ruthenium(II) glycodendrimers as optical and electrochemical probes. Using the prototypical concanavalin A (ConA)−mannose lectin−carbohydrate interaction as an example, oligosaccharide concentrations were electrochemically monitored. The displacement of the Ru(II) complex from lectin-functionalized gold surfaces was repeatedly regenerated. This new platform presents a method to monitor many different complex sugars in parallel.
Co-reporter:Raghavendra Kikkeri Dr.;Paola Laurino;Arjan Odedra Dr.;PeterH. Seeberger Dr.
Angewandte Chemie 2010 Volume 122( Issue 11) pp:2098-2101
Publication Date(Web):
DOI:10.1002/ange.200905053
Co-reporter:Raghavendra Kikkeri Dr.;Paola Laurino;Arjan Odedra Dr.;PeterH. Seeberger Dr.
Angewandte Chemie International Edition 2010 Volume 49( Issue 11) pp:2054-2057
Publication Date(Web):
DOI:10.1002/anie.200905053
Co-reporter:Gonçalo J. L. Bernardes, Bastien Castagner and Peter H. Seeberger
ACS Chemical Biology 2009 Volume 4(Issue 9) pp:703
Publication Date(Web):March 9, 2009
DOI:10.1021/cb900014n
Carbohydrates are the basis for many therapeutic and diagnostic strategies, yet the full potential of glycans in medicine has not been realized. The study of the precise role of different carbohydrates, bound to either proteins or lipids, is hampered by difficulties in accessing pure, well-defined glycoconjugates. This Review highlights recent advances in glycobiology with a particular emphasis on oligosaccharide synthesis and conjugation techniques for the construction of homogeneous glycoconjugates. New methods for the study of protein−glycan interactions such as carbohydrate arrays and in vivo visualization of glycosylation pattern changes will also be addressed. The development of glycotherapeutics is just beginning, and much remains to be understood about the relationship between glycoconjugate structure and function. The emergence of novel tools will certainly facilitate and expand the use of carbohydrates in therapeutics and diagnostics.Keywords: Automated synthesis of oligosaccharides: Programmed synthesis of oligosaccharide structures by a machine.; Bio-orthogonal: Non-native chemical handle that allows chemical modification without compromising the protein solution or living cell.; Chemoenzymatic: Combined chemical and enzymatic approach toward the synthesis of biomolecules.; Glycoarrays: Glycans attached to a surface in a spatially defined and miniaturized fashion.; Glycoform: Glycosylated proteins that possess the same peptide backbone but different nature and site of glycosylation.; Glycome: Entirety of glycans associated within an organism.Keywords: Carbohydrate-based vaccines: Carbohydrate antigen based vaccines; typically the carbohydrate antigen is conjugated to a protein carrier.; Glycotools: Toolkit for the synthesis, conjugation, and analysis of carbohydrates in biological systems.; GPI anchored protein: Protein modified posttranslationally by glycosylation and lipidation; glycosyl phosphatidylinositol (GPI) anchor is used for the correct attachment of proteins to cell surfaces.; Native chemical ligation (NCL): widespread method for the total synthesis of proteins based on seminal ligations developed by Wieland and co-workers in 1953 (98); involves the reaction of two unprotected peptide moieties bearing a C-terminal thioester and a N-terminal cysteine.
Co-reporter:Anika Reinhardt, Marko Wehle, Andreas Geissner, Erika C. Crouch, Yu Kang, You Yang, Chakkumkal Anish, Mark Santer, Peter H. Seeberger
Journal of Structural Biology (September 2016) Volume 195(Issue 3) pp:387-395
Publication Date(Web):1 September 2016
DOI:10.1016/j.jsb.2016.06.019
As a major player of the innate immune system, surfactant protein D (SP-D) recognizes and promotes elimination of various pathogens such as Gram-negative bacteria. SP-D binds to l-glycero-d-manno-heptose (Hep), a constituent of the partially conserved lipopolysaccharide (LPS) inner core of many Gram-negative bacteria. Binding and affinity of trimeric human SP-D to Hep in distinct LPS inner core glycans differing in linkages and adjacent residues was elucidated using glycan array and surface plasmon resonance measurements that were compared to in silico interaction studies. The combination of in vitro assays using defined glycans and molecular docking and dynamic simulation approaches provides insights into the interaction of trimeric SP-D with those glycan ligands. Trimeric SP-D wildtype recognized larger LPS inner core oligosaccharides with slightly enhanced affinity than smaller compounds suggesting the involvement of stabilizing secondary interactions. A trimeric human SP-D mutant D324N + D325N + R343K resembling rat SP-D bound to various LPS inner core structures in a similar pattern as observed for the wildtype but with higher affinity. The selective mutation of SP-D promotes targeting of LPS inner core oligosaccharides on Gram-negative bacteria to develop novel therapeutic agents.
Co-reporter:Raghavendra Kikkeri ; Dan Grünstein
Journal of the American Chemical Society () pp:
Publication Date(Web):July 12, 2010
DOI:10.1021/ja103688s
A novel, digital, single-operation analytical method to study glycodendrimer−lectin interactions is described. Robust, highly fluorescent derivatives of tris(bipyridine)ruthenieum(II) ([Ru(bipy)3]2+) bearing 2, 4, 6, or 18 mannose or galactose units were designed to perform molecular logic operations. Inputs for these systems were pH, N,N′-4,4′-bis(benzyl-2-boronic acid)bipyridinium dibromide, and different lectins (concanavalin A, Galantus nivalis agglutinin, and asialoglycoprotein). The relative change in fluorescence quantum yield of the Ru(II)-glycodendrimers served as output. Together, the fluorescent emission readout, the logic analysis of the photoinduced electron transfer, and the optical behavior provide a single-step method to quickly screen a glycodendrimer library and select the best dendrimer model for studying carbohydrate−lectin interactions.
Co-reporter:Tomoya Nobuta, Guozhi Xiao, Diego Ghislieri, Kerry Gilmore and Peter H. Seeberger
Chemical Communications 2015 - vol. 51(Issue 82) pp:NaN15136-15136
Publication Date(Web):2015/08/24
DOI:10.1039/C5CC06093A
Five active pharmaceutical ingredients (APIs) containing the vicinyl amino alcohol moiety were synthesized using a convergent chemical assembly system. The continuous system is composed of four flow reaction modules: biphasic oxidation, Corey–Chaykovsky epoxidation, phenol alkylation, and epoxide aminolysis. Judicious choice of reagents and module order allowed for two classes of β-amino alcohols, aryl and aryloxy, to be synthesized in good (27–69%) overall yields.
Co-reporter:Mattan Hurevich and Peter H. Seeberger
Chemical Communications 2014 - vol. 50(Issue 15) pp:NaN1853-1853
Publication Date(Web):2013/12/17
DOI:10.1039/C3CC48761J
Current strategies for the synthesis of glycopeptides require multiple manual synthetic steps. Here, we describe a synthesis concept that merges solid phase peptide and oligosaccharide syntheses and can be executed automatically using a single instrument.
Co-reporter:Jeyakumar Kandasamy, Frank Schuhmacher, Heung Sik Hahm, James C. Klein and Peter H. Seeberger
Chemical Communications 2014 - vol. 50(Issue 15) pp:NaN1877-1877
Publication Date(Web):2014/01/03
DOI:10.1039/C3CC48860H
Dermatan sulfates are glycosaminoglycan polysaccharides that serve a multitude of biological roles as part of the extracellular matrix. Orthogonally protected D-galactosamine and L-iduronic acid building blocks and a photo-cleavable linker are instrumental for the automated synthesis of dermatan sulfate oligosaccharides. Conjugation-ready oligosaccharides were obtained in good yield.
Co-reporter:Raghavendra Kikkeri, Xinyu Liu, Alexander Adibekian, Yu-Hsuan Tsai and Peter H. Seeberger
Chemical Communications 2010 - vol. 46(Issue 13) pp:NaN2199-2199
Publication Date(Web):2010/02/24
DOI:10.1039/B925113H
A facile and flexible approach for the preparation of Ru(II) complexes containing different carbohydrates based on the Cu(II)-catalyzed Huisgen-[3+2] cycloaddition is described.
Co-reporter:Pierre Stallforth, Stefan Matthies, Alexander Adibekian, Dennis G. Gillingham, Donald Hilvert and Peter H. Seeberger
Chemical Communications 2012 - vol. 48(Issue 98) pp:NaN11989-11989
Publication Date(Web):2012/10/24
DOI:10.1039/C2CC37305J
A chemoenzymatic synthesis of sialic acid from inexpensive N-acetyl-D-glucosamine is described. In a three-step Wittig–protection–ozonolysis strategy manno-configured aldehydes are obtained. Treatment with oxaloacetate in the presence of macrophomate synthase affords the signature α-keto-γ-hydroxy acid moiety with high diastereoselectivity.
Co-reporter:Christopher E. Martin, Markus W. Weishaupt and Peter H. Seeberger
Chemical Communications 2011 - vol. 47(Issue 37) pp:NaN10262-10262
Publication Date(Web):2011/08/18
DOI:10.1039/C1CC13614C
Clostridium difficile strain ribotype 027 is a hypervirulent pathogen that is responsible for recent, severe outbreaks of serious nosocomial infections. As a foundation for the development of a preventative carbohydrate-based vaccine, we have synthesized a pentasaccharide cell wall repeating unit from PS-I unique to this strain, by the linear assembly of four monosaccharide building blocks.
Co-reporter:Takafumi Ohara, Alexander Adibekian, Davide Esposito, Pierre Stallforth and Peter H. Seeberger
Chemical Communications 2010 - vol. 46(Issue 23) pp:NaN4108-4108
Publication Date(Web):2010/05/07
DOI:10.1039/C000784F
A short and enantioselective de novo synthesis of an L-glycero-D-manno-heptose building block for the total synthesis of a Yersinia pestis cell wall polysaccharide is described.
Co-reporter:You Yang, Christopher E. Martin and Peter H. Seeberger
Chemical Science (2010-Present) 2012 - vol. 3(Issue 3) pp:NaN899-899
Publication Date(Web):2011/12/08
DOI:10.1039/C1SC00804H
The first total synthesis of the core tetrasaccharide α-GlcNAc-(1 → 2)-α-Hep-(1 → 3)-α-Hep-(1 → 5)-α-Kdo of Neisseria meningitidis LPS is achieved in a convergent and stereocontrolled [2 + 2] approach, whereby heptose building blocks obtained by de novo synthesis were fine-tuned for the effective assembly of the 1 → 5 linked Hep-Kdo disaccharide. The synthetic strategy incorporates an α-linked spacer at the reducing end of the tetrasaccharide for use as a handle during subsequent conjugation to a carrier protein.
Co-reporter:Farhan R. Bou-Hamdan and Peter H. Seeberger
Chemical Science (2010-Present) 2012 - vol. 3(Issue 5) pp:NaN1616-1616
Publication Date(Web):2012/02/09
DOI:10.1039/C2SC01016J
The first application of visible-light-mediated synthetic photochemistry in continuous flow is described. Using an operationally simple photoreactor design, several Ru(bpy)32+-catalyzed transformations were performed with 10–50 fold rate enhancement over the corresponding batch methods. In the process, lower catalyst loadings were needed to produce the desired products in excellent yields within residence times between 1 and 30 min, while minimal waste byproducts were formed. The process is readily scalable and provides access to large quantities of product in relatively short time.
Co-reporter:Lenz Kröck, Davide Esposito, Bastien Castagner, Cheng-Chung Wang, Pascal Bindschädler and Peter H. Seeberger
Chemical Science (2010-Present) 2012 - vol. 3(Issue 5) pp:NaN1622-1622
Publication Date(Web):2012/02/20
DOI:10.1039/C2SC00940D
Understanding the structure–function relationship of carbohydrates in biological systems is a major challenge. Such investigations require fast and reliable access to structurally-defined oligosaccharides. To date, oligosaccharide synthesis has been considered technically difficult and only parts of the synthetic process have been automated using solution and solid-phase techniques. Here, we describe a versatile platform integrating a new synthesis strategy and a fully-automated oligosaccharide synthesizer. Structurally diverse conjugation-ready oligosaccharides can be generated for the creation of glycoconjugates and microarrays. Biologically-significant oligosaccharides of increasing length, structural complexity, and chemical diversity were produced, including glycans found on the surfaces of pathogenic bacteria, and those with integral roles in inflammatory and immune responses.
Co-reporter:Gonçalo J. L. Bernardes, Raghavendra Kikkeri, Maha Maglinao, Paola Laurino, Mayeul Collot, Sung You Hong, Bernd Lepenies and Peter H. Seeberger
Organic & Biomolecular Chemistry 2010 - vol. 8(Issue 21) pp:NaN4996-4996
Publication Date(Web):2010/09/02
DOI:10.1039/C0OB00372G
Targeting glycan-binding receptors is an attractive strategy for cell-specific drug and gene delivery. The C-type lectin asialoglycoprotein receptor (ASGPR) is particularly suitable for liver-specific delivery due to its exclusive expression by parenchymal hepatocytes. In this study, we designed and developed an efficient synthesis of carbohydrate-functionalized β-cyclodextrins (βCDs) and liposomes for hepatocyte-specific delivery. For targeting of ASGPR, rhodamine B-loaded βCDs were functionalized with glycodendrimers. Liposomes were equipped with synthetic glycolipids containing a terminal D-GalNAc residue to mediate binding to ASGPR. Uptake studies in the human hepatocellular carcinoma cell line HepG2 demonstrated that βCDs and liposomes displaying terminal D-Gal/D-GalNAc residues were preferentially endocytosed. In contrast, uptake of βCDs and liposomes with terminal D-Man or D-GlcNAc residues was markedly reduced. The D-Gal/D-GalNAc-functionalized βCDs and liposomes presented here enable hepatocyte-specific targeting. Gal-functionalized βCDs are efficient molecular carriers to deliver doxorubicin in vitro into hepatocytes and induce apoptosis.
Co-reporter:Alexander Adibekian, Pierre Stallforth, Marie-Lyn Hecht, Daniel B. Werz, Pascal Gagneux and Peter H. Seeberger
Chemical Science (2010-Present) 2011 - vol. 2(Issue 2) pp:NaN344-344
Publication Date(Web):2010/11/05
DOI:10.1039/C0SC00322K
A comparative analysis of bacterial and mammalian glycomes based on the statistical analysis of two major carbohydrate databases, Bacterial CarbohydrateStructure Data Base (BCSDB) and GLYCOSCIENCES.de (GS), is presented. An in-depth comparison of these two glycomes reveals both striking differences and unexpected similarities. Within the prokaryotic kingdom, we focus on the glycomes of seven classes of pathogenic bacteria with respect to (i) their most abundant monosaccharide units; (ii) disaccharide pairs; (iii) carbohydrate modifications; (iv) occurrence and use of sialic acids; and (v) class-specific monosaccharides. The aim of this work is to gain insights into unique carbohydrate patterns in bacteria. Data interpretation reveals significant trends in the composition of specific carbohydrate classes as result of evolution-driven structural adaptations of bacterial pathogens and symbionts to their mammalian hosts. The differences are discussed in light of their value for biomedical applications, such as the targeting of unique glycosyl transferases, vaccine development, and devising novel diagnostic tools.
Co-reporter:B. Schumann, R. Pragani, C. Anish, C. L. Pereira and P. H. Seeberger
Chemical Science (2010-Present) 2014 - vol. 5(Issue 5) pp:NaN2002-2002
Publication Date(Web):2014/03/11
DOI:10.1039/C3SC53362J
Commensal bacteria are ubiquitous inhabitants of mucosal surfaces and play an important role in promoting the maturation of the mammalian immune system. Zwitterionic polysaccharides (ZPSs) are found on the surface of certain commensal bacteria and exhibit important immunomodulatory activity. ZPSs are the first known carbohydrate antigens to induce an immune response by a T cell-dependent pathway. To understand the mechanism of their immunomodulatory activity, structurally-defined ZPS probes are needed. Here, we report the first total syntheses of conjugation-ready repeating units of the two most prominent ZPSs, S. pneumoniae Sp1 (1) and B. fragilis PS A1 (2), and their immunological characterization after conjugation to reporter moieties. The introduction of a thioether-containing linker at an early stage of the synthesis called for establishing a method to chemoselectively activate thioglycosides in the presence of benzylthioethers. After oligosaccharide assembly, the same mild activation conditions were used in a novel way to introduce a benzyloxymethyl ether to cap the base-labile AAT residue, which allowed for completion of the syntheses. The appended thiol linkers enabled the conjugation of oligosaccharides 1 and 2 to glycan array and carrier protein moieties. Glycan array analysis revealed recognition of synthetic Sp1, but not PS A1, by antiserum against the native polysaccharide, demonstrating the applicability of conjugation-ready ZPS probes in biochemical settings. Further studies will give insight into the immunomodulatory properties of ZPSs.
Co-reporter:Alexander G. O'Brien, François Lévesque and Peter H. Seeberger
Chemical Communications 2011 - vol. 47(Issue 9) pp:NaN2690-2690
Publication Date(Web):2010/12/20
DOI:10.1039/C0CC04481D
An efficient, safe and scalable procedure for the continuous flow thermolysis of azidoacrylates to yield indoles has been developed and was applied to the synthesis of related heterocycles. The scalability of the process was demonstrated in the continuous flow synthesis of a precursor to the DAAO inhibitor 4H-furo[3,2-b]pyrrole-5-carboxylic acid.
Co-reporter:Christopher E. Martin, Felix Broecker, Steffen Eller, Matthias A. Oberli, Chakkumkal Anish, Claney L. Pereira and Peter H. Seeberger
Chemical Communications 2013 - vol. 49(Issue 64) pp:NaN7161-7161
Publication Date(Web):2013/06/18
DOI:10.1039/C3CC43545H
Clostridium difficile is a leading cause of severe nosocomial infections. Cell-surface carbohydrate antigens are promising vaccine candidates. Here we report the first total synthesis of oligomers of the lipoteichoic acid antigen repeating unit. Synthetic glycan microarrays revealed anti-glycan antibodies in the blood of patients that help to define epitopes for vaccine development.
Co-reporter:Jeyakumar Kandasamy, Mattan Hurevich and Peter H. Seeberger
Chemical Communications 2013 - vol. 49(Issue 40) pp:NaN4455-4455
Publication Date(Web):2013/01/22
DOI:10.1039/C3CC00042G
Automated solid phase synthesis enables rapid access to the linear and branched arabinofuranoside oligosaccharides. A simple purification step is sufficient to provide the conjugation ready oligosaccharides in good yield.
Co-reporter:Kerry Gilmore, Daniel Kopetzki, Ju Weon Lee, Zoltán Horváth, D. Tyler McQuade, Andreas Seidel-Morgenstern and Peter H. Seeberger
Chemical Communications 2014 - vol. 50(Issue 84) pp:NaN12655-12655
Publication Date(Web):2014/08/29
DOI:10.1039/C4CC05098C
Described is a continuous, divergent synthesis system which is coupled to continuous purification and is capable of producing four anti-malarial APIs. The system is comprised of three linked reaction modules for photooxidation/cyclization, reduction, and derivatization. A fourth module couples the crude reaction stream with continuous purification to yield pure API.
Co-reporter:Dmitry B. Ushakov, Kerry Gilmore and Peter H. Seeberger
Chemical Communications 2014 - vol. 50(Issue 84) pp:NaN12651-12651
Publication Date(Web):2014/09/03
DOI:10.1039/C4CC04932B
Tri- or tetrasubstituted α-cyanoepoxides can be rapidly prepared from unactivated amines and malononitrile or methyl cyanoacetate when singlet oxygen, produced in a continuous-flow photoreactor, serves as an oxidant and in situ peroxide source. The hydrogen peroxide generated in amine oxidation epoxidizes an electron deficient olefin intermediate, formed by deaminative Mannich coupling. The corresponding α,α-dicyano- or α-cyano-α-esterepoxides were obtained in good yields (43–82%).
Co-reporter:Richard J. Fair, Heung Sik Hahm and Peter H. Seeberger
Chemical Communications 2015 - vol. 51(Issue 28) pp:NaN6185-6185
Publication Date(Web):2015/03/02
DOI:10.1039/C5CC01368B
A synthetic strategy combining automated solid-phase chemical synthesis and enzymatic sialylation was developed to access α(2,3)-sialylated glycans.
2-Amino-2-(4-fluorophenyl)acetic acid hydrochloride
2-Amino-2-(3-(trifluoromethyl)phenyl)acetic acid hydrochloride
2-AMINO-3-(4-FLUOROPHENYL)PROPANENITRILE
5-(4-fluorophenyl)-2,4-Imidazolidinedione
5-[(3-fluorophenyl)methyl]-2,4-Imidazolidinedione
Benzeneacetonitrile, a-amino-2-fluoro-
[5,6]Fullerene-C -I -octadecol
5-(1,1-dimethylethyl)-2,4-Imidazolidinedione
5-(2-phenylethyl)-2,4-Imidazolidinedione