Jianhua Ju

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Organization: South China Sea Institute of Oceanology
Department: CAS Key Laboratory of Marine Bio-resources Sustainable Utilization, Guangdong Key Laboratory of Marine Materia Medica, RNAM Center for Marine Microbiology
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Co-reporter:Chun Gui, Xuhua Mo, Yu-Cheng Gu, and Jianhua Ju
Organic Letters October 20, 2017 Volume 19(Issue 20) pp:5617-5617
Publication Date(Web):October 3, 2017
DOI:10.1021/acs.orglett.7b02758
Anthracycline antitumor cytorhodins X and Y feature a rare 9α-glycoside and 7-dexoy-aglycone. Characterization of the cytorhodin gene cluster from Streptomyces sp. SCSIO 1666 through gene inactivations and metabolite analyses reveals three glycosyltransferases (GTs) involved in the sugar tailoring steps. The duo of CytG1 and CytL effects C-7 glycosylation with l-rhodosamine whereas the iterative GT CytG3 and CytW similarly modifies both C-9 and C-10 positions. CytG2 also acts iteratively by incorporating the second and third sugar moiety into the trisaccharide chains at the C-7 or C-10 position.
Co-reporter:Minghe Luo, Zhaomeng Cui, Hongbo Huang, Xianqin Song, Aijun Sun, Yongjun Dang, Laichun Lu, and Jianhua Ju
Journal of Natural Products May 26, 2017 Volume 80(Issue 5) pp:1668-1668
Publication Date(Web):May 16, 2017
DOI:10.1021/acs.jnatprod.7b00269
Emodacidamides A–H (1–8), natural products featuring anthraquinone–amino acid conjugates, have been isolated from a marine-derived fungus, Penicillium sp. SCSIO sof101, together with known anthraquinones 9 and 10. The planar structures of 1–8 were elucidated using a combination of NMR spectroscopy and mass spectrometry. The absolute configurations of the amino acid residues were confirmed using Marfey’s method and chiral-phase HPLC analyses. Additionally, isolates were evaluated for possible immunomodulatory and cytotoxic activities. Emodacidamides A (1), C (3), D (4), and E (5) inhibited interleukin-2 secretion from Jurkat cells with IC50 values of 4.1, 5.1, 12, and 5.4 μM, respectively.
Co-reporter:Chun Gui, Shanwen Zhang, Xiangcheng Zhu, Wenjuan Ding, Hongbo Huang, Yu-Cheng Gu, Yanwen Duan, and Jianhua Ju
Journal of Natural Products May 26, 2017 Volume 80(Issue 5) pp:1594-1594
Publication Date(Web):May 10, 2017
DOI:10.1021/acs.jnatprod.7b00176
Two new spirotetronate aglycones, 22-dehydroxymethyl-kijanolide (1) and 8-hydroxy-22-dehydroxymethyl-kijanolide (2), along with seven new spirotetronate glycosides, microsporanates A–F (3–8) and tetrocarcin P (9), together with three known tetrocarcins [tetrocarcins A (10), B (11), and AC6H (12)], were isolated from fermentation broths of the marine-derived Micromonospora harpali SCSIO GJ089. The structures of 1–9 were elucidated on the basis of 1D and 2D NMR and MS spectroscopic data. Compounds 3–8 feature an α,β-unsaturated carbonyl moiety within their spirotetronate skeletons. Moreover, compounds 3–12 displayed strong to moderate antibacterial activities against Gram positive bacteria Bacillus thuringiensis BT01 and B. subtilis BS01 with MIC values ranging from 0.016 to 8.0 μg/mL.
Co-reporter:Yi-Huan Wang;Nimaichand Salam;Qing Liu;Zi-Wen Yang;Li-Xiang Cao
3 Biotech 2017 Volume 7( Issue 6) pp:366
Publication Date(Web):06 October 2017
DOI:10.1007/s13205-017-0989-x
The present study reports the diversity of culturable bacteria associated with the puffer fish Gastrophysus spadiceus. During the study, a total of 31 strains affiliated to the genera Pseudomonas, Janthinobacterium, Rahnella, and Psychrobacter were isolated from liver, intestines, and flesh of G. spadiceus. These strains exhibited a diverse range of metabolites as indicated by the HPLC and TLC profiles of the chemical extracts of their fermentation products. Some of these crude extracts showed strong antimicrobial activities against pathogenic bacterial strains. In addition, few crude extracts exhibit insecticidal activity against Artemia salina.
Co-reporter:Yongxiang Song, Qinglian Li, Fengxiang Qin, Changli Sun, Hao Liang, Xiaoyi Wei, Nai-Kei Wong, Li Ye, Yun Zhang, Mingwei Shao, Jianhua Ju
Tetrahedron 2017 Volume 73, Issue 36(Issue 36) pp:
Publication Date(Web):7 September 2017
DOI:10.1016/j.tet.2017.07.034
Neoabyssomicin A (1) possessing a caged 6/6/6 ring system fused with two additional 6/9 lactone rings, neoabyssomicin B (2) featuring a 12-membered macrolactone ring and its seco-form, neoabyssomicin C (3), along with the known abyssomicin 2 (4) and 4 (5), were discovered from the deep-sea derived Streptomyces koyangensis SCSIO 5802. The structures of 1–3 were elucidated on the basis of MS, NMR spectroscopic and X-ray diffraction data analyses. A plausible biogenetic relationship of 1–5 is proposed. Additionally, compound 4 shows antibacterial activities against a panel of Gram-positive pathogens, including clinical MRSA strains, with MICs of 3–15 μg/mL; compounds 1 and 3 also were found to augment HIV-1 virus replication in a human lymphocyte model.Download high-res image (259KB)Download full-size image
Co-reporter:Qinglian Li; Xiangjing Qin; Jing Liu; Chun Gui; Bo Wang; Jie Li
Journal of the American Chemical Society 2015 Volume 138(Issue 1) pp:408-415
Publication Date(Web):December 15, 2015
DOI:10.1021/jacs.5b11380
The nonproteinogenic amino acid l-allo-isoleucine (l-allo-Ile) is featured in an assortment of life forms comprised of, but not limited to, bacteria, fungi, plants and mammalian systems including Homo sapiens. Despite its ubiquity and functional importance, the specific origins of this unique amino acid have eluded characterization. In this study, we describe the discovery and characterization of two enzyme pairs consisting of a pyridoxal 5′-phosphate (PLP)-linked aminotransferase and an unprecedented isomerase synergistically responsible for the biosynthesis of l-allo-Ile from l-isoleucine (l-Ile) in natural products. DsaD/DsaE from the desotamide biosynthetic pathway in Streptomyces scopuliridis SCSIO ZJ46, and MfnO/MfnH from the marformycin biosynthetic pathway in Streptomyces drozdowiczii SCSIO 10141 drive l-allo-Ile generation in each respective system. In vivo gene inactivations validated the importance of the DsaD/DsaE pair and MfnO/MfnH pair in l-allo-Ile unit biosynthesis. Inactivation of PLP-linked aminotransferases DsaD and MfnO led to significantly diminished desotamide and marformycin titers, respectively. Additionally, inactivation of the isomerase genes dsaE and mfnH completely abolished production of all l-allo-Ile-containing metabolites in both biosynthetic pathways. Notably, in vitro biochemical assays revealed that DsaD/DsaE and MfnO/MfnH each catalyze a bidirectional reaction between l-allo-Ile and l-Ile. Site-directed mutagenesis experiments revealed that the enzymatic reaction involves a PLP-linked ketimine intermediate and uses an arginine residue from the C-terminus of each isomerase to epimerize the amino acid β-position. Consequently, these data provide important new insight into the origins of l-allo-Ile in natural products with medicinal potential and illuminate new possibilities for biotool development.
Co-reporter:Chun Gui, Qinglian Li, Xuhua Mo, Xiangjing Qin, Junying Ma, and Jianhua Ju
Organic Letters 2015 Volume 17(Issue 3) pp:628-631
Publication Date(Web):January 26, 2015
DOI:10.1021/ol5036497
Bioinformatic analyses indicate that TrdC, SlgL, LipX2, KirHI, and FacHI belong to a group of highly homologous proteins involved in biosynthesis of actinomycete-derived tirandamycin B, streptolydigin, α-lipomycin, kirromycin, and factumycin, respectively. However, assignment of their biosynthetic roles has remained elusive. Gene inactivation and complementation, in vitro biochemical assays with synthetic analogues, point mutations, and phylogenetic tree analyses reveal that these proteins represent a new family of Dieckmann cyclases that drive tetramic acid and pyridone scaffold biosynthesis.
Co-reporter:Jing Liu, Bo Wang, Hongzhi Li, Yunchang Xie, Qinglian Li, Xiangjing Qin, Xing Zhang, and Jianhua Ju
Organic Letters 2015 Volume 17(Issue 6) pp:1509-1512
Publication Date(Web):March 6, 2015
DOI:10.1021/acs.orglett.5b00389
The biosynthetic gene cluster governing production of anti-infective marformycins was identified from deep sea-derived Streptomyces drozdowiczii SCSIO 10141. The putative mfn gene cluster (45 kb, 20 orfs) was found to encode six NRPSs and related proteins for cyclodepsipeptide core construction (mfnCDEFKL), a methionyl-tRNA formyltransferase (mfnA), a SAM-dependent methyltransferase (mfnG), and a cytochrome P450 monooxygenase for piperazic acid moiety hydroxylation (mfnN); notably, only MfnN uses an intact cyclodepsipeptide intermediate as its substrate.
Co-reporter:Yongxiang Song ; Qinglian Li ; Xue Liu ; Yuchan Chen ; Yun Zhang ; Aijun Sun ; Weimin Zhang ; Jingren Zhang
Journal of Natural Products 2014 Volume 77(Issue 8) pp:1937-1941
Publication Date(Web):July 29, 2014
DOI:10.1021/np500399v
Three new cyclohexapeptides, desotamides B–D (2–4), and the known desotamide (1) were isolated from marine microbe Streptomyces scopuliridis SCSIO ZJ46. The sequences and absolute configurations of 2–4 were elucidated on the basis of high-resolution spectroscopic data, Marfey’s method, and chiral-phase HPLC data. Desotamide C (3) contains a unique N-formyl-kynurenine residue, whereas 4 lacks formylation at the same site. Compounds 1 and 2 displayed notable antibacterial activities against strains of Streptococcus pnuemoniae, Staphylococcus aureus, and methicillin-resistant Staphylococcus epidermidis (MRSE), and structure activity relationship studies revealed the indispensability of the Trp component for antibacterial activity within this new scaffold.
Co-reporter:Xuhua Mo, Qinglian Li and Jianhua Ju  
RSC Advances 2014 vol. 4(Issue 92) pp:50566-50593
Publication Date(Web):26 Sep 2014
DOI:10.1039/C4RA09047K
Natural products containing the tetramic acid core scaffold have been isolated from an assortment of terrestrial and marine species and often display wide ranging and potent biological activities including antibacterial, antiviral and antitumoral activities. Owing to their intriguing structure and biological activity, tetramic acid-containing agents, both natural and synthetic, are attracting increasingly significant attention from biologists and chemists. Indeed, this increasing enthusiasm has led to significant advances. The goal of this review is to present not only these advances but also the broader context that frames them and provides a complete view of the naturally occurring tetramic acids inclusive of studies aimed at isolation, structure elucidation, and evaluation of biological activities. Consistent with advances over the past decade this review covers the period spanning 2002 to 2013.
Co-reporter:Changtao Ji, Qi Chen, Qinglian Li, Hongbo Huang, Yongxiang Song, Junying Ma, Jianhua Ju
Tetrahedron Letters 2014 Volume 55(Issue 35) pp:4901-4904
Publication Date(Web):27 August 2014
DOI:10.1016/j.tetlet.2014.07.004
McbA was characterized in vitro as a novel amide synthetase in the marinacarbolines A–D biosynthetic pathway, catalyzing amide bond formation between 1-acetyl-3-carboxy-β-carboline (1a) and substituted-β-phenethylamines (1b, 2b, 3b) and tryptamine (4b) in an ATP-dependent manner. Enzyme kinetic analyses highlight β-phenethylamine as the most suitable amine donor. McbA showed broad substrate compatibility with substituted amines; 10 new β-carboline analogues were chemoenzymatically generated.
Co-reporter:Dr. Yunchang Xie;Dr. Qinglian Li;Dr. Yongxiang Song;Dr. Junying Ma ; Dr. Jianhua Ju
ChemBioChem 2014 Volume 15( Issue 8) pp:1183-1189
Publication Date(Web):
DOI:10.1002/cbic.201400062

Abstract

Griseoviridin (GV) is an A-type streptogramin antibiotic displaying antimicrobial activity and acting synergistically with viridogrisein (VG). Bioinformatic analyses reveal SgvP as the sole cytochrome P450 enzyme in the GV/VG gene cluster. To explore the role of SgvP in the GV/VG pathway, we inactivated the sgvP gene. The resulting ΔsgvP mutant generated two new products: GV-1 and GV-2, both lacking the CS bridge. In trans complementation of the sgvP gene into the ΔsgvP mutant strain partially restores GV production. Feeding [1-13C]-labeled cysteine to the wild-type strain led to enrichment of C-7 in the GV scaffold, thus verifying that the CS bond in GV is formed through direct coupling of the free SH group provided by the side chain of cysteine. The above results highlight the significance of SgvP in CS bond formation in griseoviridin biosynthesis.

Co-reporter:Yun Zhang, Hongbo Huang, Qi Chen, Minghe Luo, Aijun Sun, Yongxiang Song, Junying Ma, and Jianhua Ju
Organic Letters 2013 Volume 15(Issue 13) pp:3254-3257
Publication Date(Web):June 19, 2013
DOI:10.1021/ol401253p
The gene cluster responsible for grincamycin (GCN, 1) biosynthesis in Streptomyces lusitanus SCSIO LR32 was identified; heterologous expression of the GCN cluster in S. coelicolor M512 yielded P-1894B (1b) as a predominant product. The ΔgcnQ mutant accumulates intermediate 1a and two shunt products 2a and 3a bearing l-rhodinose for l-cinerulose A substitutions. In vitro data demonstrated that GcnQ is capable of iteratively tailoring the two l-rhodinose moieties into l-aculose moieties, supporting divergent roles of GcnQ in different hosts.
Co-reporter:Bo Wang, Yongxiang Song, Minghe Luo, Qi Chen, Junying Ma, Hongbo Huang, and Jianhua Ju
Organic Letters 2013 Volume 15(Issue 6) pp:1278-1281
Publication Date(Web):February 25, 2013
DOI:10.1021/ol400224n
9-Methylstreptimidone is a glutarimide antibiotic showing antiviral, antifungal, and antitumor activities. Genome scanning, bioinformatics analysis, and gene inactivation experiments reveal a gene cluster responsible for the biosynthesis of 9-methylstreptimidone in Streptomyces himastatinicus. The unveiled machinery features both acyltransferase- and thioesterase-less iterative use of module 5 as well as a branching module for glutarimide generation. Impressively, inactivation of smdK leads to a new carboxylate analogue unveiling a new mechanism for polyketide terminal diene formation.
Co-reporter:Yongxiang Song, Hongbo Huang, Yuchan Chen, Jie Ding, Yun Zhang, Aijun Sun, Weimin Zhang, and Jianhua Ju
Journal of Natural Products 2013 Volume 76(Issue 12) pp:2263-2268
Publication Date(Web):November 19, 2013
DOI:10.1021/np4006025
Four new sesquiterpenoid naphthoquinones, marfuraquinocins A–D (1–4), and two new geranylated phenazines, phenaziterpenes A (5) and B (6), were isolated from the fermentation broth of Streptomyces niveus SCSIO 3406, which originated from a South China Sea sediment sample obtained from a depth of 3536 m. The structures of 1–6 were elucidated on the basis of extensive MS and one-dimensional and two-dimensional NMR spectroscopic analyses. In a panel of cytotoxicity and antibacterial assays, 1 and 3 were found to inhibit a NCI-H460 cancer cell line with IC50 values of 3.7 and 4.4 μM, respectively. Compounds 1, 3, and 4 exhibited antibacterial activities against Staphylococcus aureus ATCC 29213 with equivalent MIC values of 8.0 μg/mL; compounds 3 and 4 each showed antibacterial activity against methicillin-resistant Staphylococcus epidermidis (MRSE) shhs-E1 with MIC values of 8.0 μg/mL.
Co-reporter:Qi Chen;Changtao Ji;Dr. Yongxiang Song;Dr. Hongbo Huang;Dr. Junying Ma;Dr. Xinpeng Tian;Dr. Jianhua Ju
Angewandte Chemie International Edition 2013 Volume 52( Issue 38) pp:9980-9984
Publication Date(Web):
DOI:10.1002/anie.201303449
Co-reporter:Qi Chen;Changtao Ji;Dr. Yongxiang Song;Dr. Hongbo Huang;Dr. Junying Ma;Dr. Xinpeng Tian;Dr. Jianhua Ju
Angewandte Chemie 2013 Volume 125( Issue 38) pp:10164-10168
Publication Date(Web):
DOI:10.1002/ange.201303449
Co-reporter:Yun Zhang, Xiao Zhou, Hongbo Huang, Xinpeng Tian, Yongxiang Song, Si Zhang and Jianhua Ju
The Journal of Antibiotics 2013 66(6) pp:327-331
Publication Date(Web):April 3, 2013
DOI:10.1038/ja.2013.15
03219A (1), a new pregnene steroid possessing a rare Δ8,9-double bond in the skeleton, together with the known naphthoquinone antibiotic (+)-cryptosporin (2) have been isolated from the fermentation broth of Streptomyces sp. SCSIO 03219, which was isolated from a marine sediment collected in the South China Sea. The structure of 03219A was elucidated using a combination of NMR, MS and X-ray crystallographic methods.
Co-reporter:Xuhua Mo ; Junying Ma ; Hongbo Huang ; Bo Wang ; Yongxiang Song ; Si Zhang ; Changsheng Zhang
Journal of the American Chemical Society 2012 Volume 134(Issue 6) pp:2844-2847
Publication Date(Web):January 24, 2012
DOI:10.1021/ja206713a
The tirandamycins (TAMs) are a small group of Streptomyces-derived natural products that target bacterial RNA polymerase. Within the TAM biosynthetic cluster, trdE encodes a glycoside hydrolase whose role in TAM biosynthesis has been undefined until now. We report that in vivo trdE inactivation leads to accumulation of pre-tirandamycin, the earliest intermediate released from its mixed polyketide/nonribosomal peptide biosynthetic assembly line. In vitro and site-directed mutagenesis studies showed that TrdE, a putative glycoside hydrolase, catalyzes in a highly atypical fashion the installation of the Δ11,12 double bond during TAM biosynthesis.
Co-reporter:Hongbo Huang, Tingting Yang, Xiangmei Ren, Jing Liu, Yongxiang Song, Aijun Sun, Junying Ma, Bo Wang, Yun Zhang, Caiguo Huang, Changsheng Zhang, and Jianhua Ju
Journal of Natural Products 2012 Volume 75(Issue 2) pp:202-208
Publication Date(Web):February 3, 2012
DOI:10.1021/np2008335
Five new C-glycoside angucyclines, named grincamycins B–F (1–5), and a known angucycline antibiotic, grincamycin (6), were isolated from Streptomyces lusitanus SCSIO LR32, an actinomycete of deep sea origin. The structures of these compounds were elucidated on the basis of extensive spectroscopic analyses, including MS and 1D and 2D NMR experiments. All compounds except grincamycin F (5) exhibited in vitro cytotoxicities against the human cancer cell lines HepG2, SW-1990, HeLa, NCI-H460, and MCF-7 and the mouse melanoma cell line B16, with IC50 values ranging from 1.1 to 31 μM.
Co-reporter:Hongbo Huang, Fazuo Wang, Minghe Luo, Yuchan Chen, Yongxiang Song, Weimin Zhang, Si Zhang, and Jianhua Ju
Journal of Natural Products 2012 Volume 75(Issue 7) pp:1346-1352
Publication Date(Web):June 15, 2012
DOI:10.1021/np3002699
Metabolomic investigations focusing on the marine-derived fungus Aspergillus sp. SCSIO F063 have unveiled seven new chlorinated anthraquinones (1–7) related to averantin, together with five known analogues (11–15) when the fungus was fermented using sea salt-containing potato dextrose broth. Through the addition of sodium bromide to the broth, two new brominated anthraquinones (8, 9) and one new nonhalogenated anthraquinone (10) were obtained from the fungal mycelia. Their structures were elucidated by extensive spectroscopic analyses including MS and 1D and 2D NMR data. One metabolite, 6-O-methyl-7-chloroaveratin (2), displayed inhibition activity against three human tumor cell lines, SF-268, MCF-7, and NCI-H460, with IC50 values of 7.11, 6.64, and 7.42 μM, respectively.
Co-reporter:Xiao Zhou, Hongbo Huang, Yuchan Chen, Jiaheng Tan, Yongxiang Song, Jianhua Zou, Xinpeng Tian, Yan Hua, and Jianhua Ju
Journal of Natural Products 2012 Volume 75(Issue 12) pp:2251-2255
Publication Date(Web):December 6, 2012
DOI:10.1021/np300554f
A new sequential tristhiazole-thiazoline-containing cyclic peptide, marthiapeptide A (1), was isolated from a 60 L scale culture of the deep South China Sea-derived strain Marinactinospora thermotolerans SCSIO 00652. The planar structure and absolute configuration of 1 were elucidated by application of spectroscopic techniques, as well as by single-crystal X-ray diffraction and chiral-phase HPLC analysis of the acid hydrolysates. Marthiapeptide A (1) exhibited antibacterial activity against a panel of Gram-positive bacteria, with MIC values ranging from 2.0 to 8.0 μg/mL, and displayed strong cytotoxic activity against a panel of human cancer cell lines with IC50 values ranging from 0.38 to 0.52 μM.
Co-reporter:Ziming Chen ; Yongxiang Song ; Yuchan Chen ; Hongbo Huang ; Weimin Zhang
Journal of Natural Products 2012 Volume 75(Issue 6) pp:1215-1219
Publication Date(Web):May 29, 2012
DOI:10.1021/np300152d
Three new cycloheptapeptides, cordyheptapeptides C–E (1–3), were isolated from the fermentation extract of the marine-derived fungus Acremonium persicinum SCSIO 115. Their planar structures were elucidated on the basis of extensive MS, as well as 1D and 2D (COSY, HMQC, and HMBC) NMR spectroscopic data analyses. The absolute configurations of the amino acid residues were determined by single-crystal X-ray diffraction, Marfey’s method, and chiral-phase HPLC analysis. Compounds 1 and 3 displayed cytotoxicity against SF-268, MCF-7, and NCI-H460 tumor cell lines with IC50 values ranging from 2.5 to 12.1 μM.
Co-reporter:Ziming Chen, Zhihui Zheng, Hongbo Huang, Yongxiang Song, Xuelian Zhang, Junying Ma, Bo Wang, Changsheng Zhang, Jianhua Ju
Bioorganic & Medicinal Chemistry Letters 2012 Volume 22(Issue 9) pp:3332-3335
Publication Date(Web):1 May 2012
DOI:10.1016/j.bmcl.2012.02.106
Three new mycophenolic acid derivatives, penicacids A–C (1–3), together with two known analogues, mycophenolic acid (MPA, 4) and 4′-hydroxy-MPA (5), were isolated from a fungus Penicillium sp. SOF07 derived from a South China Sea marine sediment. The structures of compounds 1–3 were elucidated on the basis of MS and NMR (1H, 13C, HSQC and HMBC) data analyses and comparisons with the known compounds. Structure–activity relationship studies of compounds 1–5 focused on inosine-monophosphate dehydrogenase inhibition revealed that hydroxylation at C-4′, methylation at C-7-OH, dual hydroxylation at C-2′/C-3′ double bond of MPA diminished bioactivity whereas glucosyl hydroxylation at C-4′ correlated to bioactivity comparable to that observed for MPA.
Co-reporter:Yunchang Xie;Dr. Bo Wang;Jing Liu;Junchao Zhou;Dr. Junying Ma;Dr. Hongbo Huang; Dr. Jianhua Ju
ChemBioChem 2012 Volume 13( Issue 18) pp:2745-2757
Publication Date(Web):
DOI:10.1002/cbic.201200584

Abstract

Griseoviridin (GV) and viridogrisein (VG, also referred to as etamycin), produced by Streptomyces griseoviridis, are two chemically unrelated compounds belonging to the streptogramin family. Both of these natural products demonstrate broad-spectrum antibacterial activity and constitute excellent candidates for future drug development. To elucidate the biosynthetic machinery associated with production of these two unique antibiotics, the gene cluster responsible for both GV and VG production was identified within the Streptomyces griseoviridis genome and characterized, and its function in GV and VG biosynthesis was confirmed by inactivation of 30 genes and complementation experiments. This sgv gene cluster is localized to a 105 kb DNA region that consists of 36 open reading frames (ORFs), including four nonribosomal peptide synthetases (NRPSs) for VG biosynthesis and a set of hybrid polyketide synthases (PKS)-NRPSs with a discrete acyltransferase (AT), SgvQ, to assemble the GV backbone. The enzyme encoding genes for VG versus GV biosynthesis are separated into distinct “halves” of the cluster. A series of four genes: sgvA, sgvB, sgvC, and sgvK, were found downstream of the PKS-NRPS; these likely code for construction of a γ-butyrolactone (GBL)-like molecule. GBLs and the corresponding GBL receptor systems are the highest ranked regulators that are able to coordinate the two streptomyces antibiotic regulatory protein (SARP) family positive regulators SgvR2 and SgvR3; both are key biosynthetic activators. Models of GV, VG, and GBL biosynthesis were proposed by using functional gene assignments, determined on the basis of bioinformatics analysis and further supported by in vivo gene inactivation experiments. Overall, this work provides new insights into the biosyntheses of the GV and VG streptogramins that are potentially applicable to a host of combinatorial biosynthetic scenarios.

Co-reporter:Yunchang Xie;Dr. Bo Wang;Jing Liu;Junchao Zhou;Dr. Junying Ma;Dr. Hongbo Huang; Dr. Jianhua Ju
ChemBioChem 2012 Volume 13( Issue 18) pp:
Publication Date(Web):
DOI:10.1002/cbic.201290075
Co-reporter:Dr. Junying Ma;Dianguang Zuo;Dr. Yongxiang Song;Dr. Bo Wang;Dr. Hongbo Huang;Yueliang Yao; Wenjun Li; Si Zhang; Changsheng Zhang; Jianhua Ju
ChemBioChem 2012 Volume 13( Issue 4) pp:547-552
Publication Date(Web):
DOI:10.1002/cbic.201100700

Abstract

The nine-membered indolactam antibiotics belong to a small group of antibiotics showing broad biological activities. However, the in vivo genetic engineering of compounds of this type has not been performed. Here we report the identification of a single gene cluster responsible for the biosynthesis of methylpendolmycin and pendolmycin, two members of this family of antibiotics, from the deep sea bacterium Marinactinospora thermotolerans SCSIO 00652. Bioinformatics analysis and gene inactivation, coupled with metabolite characterization, reveal that MpnB, a nonribosomal peptide synthetase, MpnC, a cytochrome P450, and MpnD, a prenyltransferase, are sufficient to catalyze the biosynthesis of the two antibiotics from L-Ile (or L-Val), L-Trp, and methionine. MpnD is the first identified enzyme that transfers a C5 prenyl unit in a reverse manner to the C-7 position of a Trp-derived natural product.

Co-reporter:Xuhua Mo, Hongbo Huang, Junying Ma, Zhongwen Wang, Bo Wang, Si Zhang, Changsheng Zhang, and Jianhua Ju
Organic Letters 2011 Volume 13(Issue 9) pp:2212-2215
Publication Date(Web):April 1, 2011
DOI:10.1021/ol200447h
TrdL, encoding a flavin-dependent oxidoreductase in the tirandamycin gene cluster, was inactivated to afford a ΔtrdL mutant, the fermentation of which yielded a new intermediate, tirandamycin E (5), and an additional early intermediate, tirandamycin F (6), if XAD-16 resin was introduced. TrdL was overexpressed in E. coli, and the protein was shown to efficiently catalyze the transformations from 5 to tirandamycin A (1) and from 6 to tirandamycin D (4), demonstrating its function as a 10-hydroxy dehydrogenase.
Co-reporter:Hongbo Huang, Yueliang Yao, Zhengxiang He, Tingting Yang, Junying Ma, Xinpeng Tian, Yayong Li, Caiguo Huang, Xiaoping Chen, Wenjun Li, Si Zhang, Changsheng Zhang, and Jianhua Ju
Journal of Natural Products 2011 Volume 74(Issue 10) pp:2122-2127
Publication Date(Web):October 6, 2011
DOI:10.1021/np200399t
Four new β-carboline alkaloids, designated marinacarbolines A–D (1–4), two new indolactam alkaloids, 13-N-demethyl-methylpendolmycin (5) and methylpendolmycin-14-O-α-glucoside (6), and the three known compounds 1-acetyl-β-carboline (7), methylpendolmycin (8), and pendolmycin (9) were obtained from the fermentation broth of Marinactinospora thermotolerans SCSIO 00652, a new actinomycete belonging to the family Nocardiopsaceae. Their structures were elucidated by extensive MS and 1D and 2D NMR spectroscopic data analyses. The structure of compound 1 was further confirmed by single-crystal X-ray crystallography. The new compounds 1–6 were inactive against a panel of eight tumor cell lines (IC50 > 50 μM) but exhibited antiplasmodial activities against Plasmodium falciparum lines 3D7 and Dd2, with IC50 values ranging from 1.92 to 36.03 μM.
Co-reporter:Ziming Chen;Hongbo Huang;Yuchan Chen;Zhongwen Wang;Junying Ma;Bo Wang;Weimin Zhang;Changsheng Zhang
Helvetica Chimica Acta 2011 Volume 94( Issue 9) pp:1671-1676
Publication Date(Web):
DOI:10.1002/hlca.201100051

Abstract

Two new cytochalasins, 18-deoxycytochalasin Q (1) and 21-O-deacetylcytochalasin Q (2), together with four known analogues, cytochalasin Q (3), 19,20-epoxycytochalasin Q (4), 21-O-deacetyl-19,20-epoxycytochalasin Q (5), and cytochalasin D (6), were isolated from the fungus Xylaria sp. SCSIO156 originated from the South China Sea marine sediment. The structures of 1 and 2 were elucidated by MS and 1D- and 2D-NMR data analyses, and comparison with known compounds. The known compounds 36 were identified by comparison of their MS and NMR data with those reported in the literature. In the in vitro antitumor assay, compounds 26 showed mild cytotoxicity against three tumor cell lines (MCF-7, SF-268, and NCI-H460).

Co-reporter:Dr. Junying Ma;Dr. Zhongwen Wang;Dr. Hongbo Huang;Minghe Luo;Dianguang Zuo;Dr. Bo Wang;Aijun Sun;Dr. Yi-Qiang Cheng;Dr. Changsheng Zhang;Dr. Jianhua Ju
Angewandte Chemie 2011 Volume 123( Issue 34) pp:7943-7948
Publication Date(Web):
DOI:10.1002/ange.201102305
Co-reporter:Dr. Junying Ma;Dr. Zhongwen Wang;Dr. Hongbo Huang;Minghe Luo;Dianguang Zuo;Dr. Bo Wang;Aijun Sun;Dr. Yi-Qiang Cheng;Dr. Changsheng Zhang;Dr. Jianhua Ju
Angewandte Chemie International Edition 2011 Volume 50( Issue 34) pp:7797-7802
Publication Date(Web):
DOI:10.1002/anie.201102305
Co-reporter:Qinglian Li; Yongxiang Song; Xiangjing Qin; Xing Zhang; Aijun Sun
Journal of Natural Products () pp:
Publication Date(Web):March 6, 2015
DOI:10.1021/acs.jnatprod.5b00009
The desotamides (DSAs) are potent antibacterial cyclohexapeptides produced by Streptomyces scopuliridis SCSIO ZJ46. We have identified the 39-kb dsa biosynthetic gene cluster by whole-genome scanning. Composed of 17 open reading frames, the cluster codes for four nonribosomal peptide synthetases and associated resistance, transport, regulatory, and precursor biosynthesis proteins. Heterologous expression of the dsa gene cluster in S. coelicolor M1152 afforded desotamides A and B and the new desotamide G. Cluster identification and its demonstrated amenability to heterologous expression provide the foundation for future mechanistic studies as well as the generation of new and potentially clinically significant DSA analogues.
(2S,3RS)-2-amino-3-methylpentanoic acid
2,4-Pyrrolidinedione, 3-(1-hydroxyethylidene)-5-methyl-, [S-(Z)]- (9CI)
4',9,9'-trihydroxy-6'-methoxy-3-[(1e,3e)-penta-1,3-dienyl]spiro[6,7-dihydro-2h-cyclopenta[g]isoquinoline-8,2'-cyclopenta[g]naphthalene]-1,1',3',5',8'-pentone
1-ACETYL-9H-PYRIDO[3,4-B]INDOLE-3-CARBOXYLIC ACID
2,4-Pyrrolidinedione, 3-(1-hydroxyethylidene)-, (Z)-
(13S,16Z,19R,6S,8S,9E,11E)-6,8-dihydroxy-19-methyl-13,4,8,9-tetrahydro-2,14-diaza-1(3,6)-[1,5]oxathionina-4(4,2)-oxazola-cyclopentadecaphane-9,11-diene-12,3,15-trione
1H-Pyrrole, 2-[(Z)-[3-methoxy-5-(1H-pyrrol-2-yl)-2H-pyrrol-2-ylidene]methyl]-5-undecyl-
Glycine,N-(1,3-dioxobutyl)-
L-Alanine, N-(1,3-dioxobutyl)-
6,23-Dioxa-26-thia-2,17,27-triazatricyclo[17.5.2.14,7]heptacosa-4,7(27),12,14,19-pentaene-3,18,24-trione,9,11-dihydroxy-22-methyl-, (1S,9R,11S,12E,14E,19Z,22R)-