David E. Cliffel

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Name: Cliffel, David
Organization: Vanderbilt University , USA
Department: Department of Chemistry
Title: (PhD)

TOPICS

Co-reporter:Jeremiah C. Beam;Evan A. Gizzie;Borislav L. Ivanov;Gabriel LeBlanc;David R. Needell;G. Kane Jennings;Charles M. Lukehart;Melinda J. Shearer
Langmuir September 15, 2015 Volume 31(Issue 36) pp:10002-10007
Publication Date(Web):2017-2-22
DOI:10.1021/acs.langmuir.5b02334
The interface between photoactive biological materials with two distinct semiconducting electrodes is challenging both to develop and analyze. Building off of our previous work using films of photosystem I (PSI) on p-doped silicon, we have deposited a crystalline zinc oxide (ZnO) anode using confined-plume chemical deposition (CPCD). We demonstrate the ability of CPCD to deposit crystalline ZnO without damage to the PSI biomaterial. Using electrochemical techniques, we were able to probe this complex semiconductor–biological interface. Finally, as a proof of concept, a solid-state photovoltaic device consisting of p-doped silicon, PSI, ZnO, and ITO was constructed and evaluated.
Co-reporter:Danielle W. Kimmel, Lisa M. Rogers, David M. Aronoff, and David E. Cliffel
Chemical Research in Toxicology 2016 Volume 29(Issue 1) pp:19
Publication Date(Web):December 10, 2015
DOI:10.1021/acs.chemrestox.5b00322
Globally, maternal and fetal health is greatly impacted by extraplacental inflammation. Group B Streptococcus (GBS), a leading cause of chorioamnionitis, is thought to take advantage of the uterine environment during pregnancy in order to cause inflammation and infection. In this study, we demonstrate the metabolic changes of murine macrophages caused by GBS exposure. GBS alone prompted a delayed increase in lactate production, highlighting its ability to redirect macrophage metabolism from aerobic to anaerobic respiration. This production of lactate is thought to aid in the development and propagation of GBS throughout the surrounding tissue. Additionally, this study shows that PGE2 priming was able to exacerbate lactate production, shown by the rapid and substantial lactate increases seen upon GBS exposure. These data provide a novel model to study the role of GBS exposure to macrophages with and without PGE2 priming.
Co-reporter:Evan A. Gizzie, J. Scott Niezgoda, Maxwell T. Robinson, Andrew G. Harris, G. Kane Jennings, Sandra J. Rosenthal and David E. Cliffel  
Energy & Environmental Science 2015 vol. 8(Issue 12) pp:3572-3576
Publication Date(Web):02 Nov 2015
DOI:10.1039/C5EE03008K
Novel Photosystem I (PSI) based solid-state solar cells were prepared by directly electropolymerizing polyaniline (PAni) in the presence of solubilized PSI on a TiO2 anode. These devices feature a unique bio-derived, photoactive composite layer for efficient charge separation and charge transfer from protein to electrode. This work introduces a new artificial photosynthesis platform for scalable and sustainable solar energy conversion.
Co-reporter:Evan A. Gizzie, Gabriel LeBlanc, G. Kane Jennings, and David E. Cliffel
ACS Applied Materials & Interfaces 2015 Volume 7(Issue 18) pp:9328
Publication Date(Web):April 21, 2015
DOI:10.1021/acsami.5b01065
In this work, we report for the first time the entrapment of the biomolecular supercomplex Photosystem I (PSI) within a conductive polymer network of polyaniline via electrochemical copolymerization. Composite polymer–protein films were prepared on gold electrodes through potentiostatic electropolymerization from a single aqueous solution containing both aniline and PSI. This study demonstrates the controllable integration of large membrane proteins into rapidly prepared composite films, the entrapment of such proteins was observed through photoelectrochemical analysis. PSI’s unique function as a highly efficient biomolecular photodiode generated a significant enhancement in photocurrent generation for the PSI-loaded polyaniline films, compared to pristine polyaniline films, and dropcast PSI films. A comprehensive study was then performed to separately evaluate film thickness and PSI concentration in the initial polymerization solution and their effects on the net photocurrent of this novel material. The best performing composite films were prepared with 0.1 μM PSI in the polymerization solution and deposited to a film thickness of 185 nm, resulting in an average photocurrent density of 5.7 μA cm–2 with an efficiency of 0.005%. This photocurrent output represents an enhancement greater than 2-fold over bare polyaniline films and 200-fold over a traditional PSI multilayer film of comparable thickness.Keywords: biocomposite materials; biohybrid solar cells; conjugated polymers; solar energy conversion;
Co-reporter:Matthew C. Casey and David E. Cliffel
Analytical Chemistry 2015 Volume 87(Issue 1) pp:334
Publication Date(Web):December 15, 2014
DOI:10.1021/ac503753g
The electrochemical reduction of 2,4,6-trinitrotoluene (TNT) was investigated using films of vanadium dioxide. Three distinct reduction peaks were observed in the potential range of −0.50 to −0.90 V (vs an Ag/AgCl reference electrode), corresponding to the electrochemical reduction of the three nitro-groups on the TNT molecule. Adsorptive stripping voltammetry was performed to achieve detection down to 1 μg/L (4.4 nM), revealing a linear response to TNT concentration. These results are the first describing the use of VO2 films as an electrochemical sensor and open new avenues for further electrochemical research using this unique material.
Co-reporter:Jennifer R. McKenzie, Andrew C. Cognata, Anna N. Davis, John P. Wikswo, and David E. Cliffel
Analytical Chemistry 2015 Volume 87(Issue 15) pp:7857
Publication Date(Web):June 30, 2015
DOI:10.1021/acs.analchem.5b01533
Real-time monitoring of changes to cellular bioenergetics can provide new insights into mechanisms of action for disease and toxicity. This work describes the development of a multianalyte screen-printed electrode for the detection of analytes central to cellular bioenergetics: glucose, lactate, oxygen, and pH. Platinum screen-printed electrodes were designed in-house and printed by Pine Research Instrumentation. Electrochemical plating techniques were used to form quasi-reference and pH electrodes. A Dimatix materials inkjet printer was used to deposit enzyme and polymer films to form sensors for glucose, lactate, and oxygen. These sensors were evaluated in bulk solution and microfluidic environments, and they were found to behave reproducibly and possess a lifetime of up to 6 weeks. Linear ranges and limits of detection for enzyme-based sensors were found to have an inverse relationship with enzyme loading, and iridium oxide pH sensors were found to have super-Nernstian responses. Preliminary measurements where the sensor was enclosed within a microfluidic channel with RAW 264.7 macrophages were performed to demonstrate the sensors’ capabilities for performing real-time microphysiometry measurements.
Co-reporter:David Crisostomo
The Journal of Physical Chemistry C 2015 Volume 119(Issue 21) pp:11296-11300
Publication Date(Web):April 28, 2015
DOI:10.1021/jp5101363
As the use of nanoparticles as biological and electronic platforms increases, research must be conducted to determine the kinetics of varying types of particles. In this paper, we determine the forward heterogeneous electron-transfer rate constant (kf) of water-soluble monolayer-protected gold nanoparticles using a scanning electrochemical microscope (SECM). Using SECM approach curves, we were able to determine the electron-transfer rates of water-soluble nanoparticles protected with a variety of ligands: tiopronin, glutathione, and trimethylammonium undecenyl mercaptan. Our results show the electron-transfer rate is largely dependent on the charge presented by the ligand shell. Fixed charges on ligands inhibit the tunneling of the electron through the protecting monolayer, making ligand charge a dominant factor in electron-transfer rates. By changing the ligand charge on tiopronin-protected gold nanoparticles through pH, we show the electron-transfer rate is inversely proportional with pH and decreases dramatically as the ligands move from an uncharged to a negatively charged species.
Co-reporter:Gabriel LeBlanc;Kevin M. Winter;William B. Crosby;G. Kane Jennings
Advanced Energy Materials 2014 Volume 4( Issue 9) pp:
Publication Date(Web):
DOI:10.1002/aenm.201301953

Photosystem I is a photoactive membrane protein used in nature to photo-excite electrons with nearly unit internal quantum efficiency, sparking interest in using this biomaterial for solar energy conversion. Films of PSI deposited on p-doped silicon have previously demonstrated significant photocurrents with an electrochemical mediator; however, improvement in electron transfer is needed. Here, it is investigated how PSI can be combined with graphene oxide (GO) or reduced graphene oxide (RGO) to generate composite films capable of improved photoelectrochemical performance. It is found that both composite films outperformed the PSI film alone, and the PSI-GO composite film is found to perform the best. The enhancement is attributed to the decreased impedance and shift in the onset potential of the composite films.

Co-reporter:Emily Darby, Gabriel LeBlanc, Evan A. Gizzie, Kevin M. Winter, G. Kane Jennings, and David E. Cliffel
Langmuir 2014 Volume 30(Issue 29) pp:8990-8994
Publication Date(Web):2017-2-22
DOI:10.1021/la5010616
Photosystem I (PSI) is a photoactive electron-transport protein found in plants that participates in the process of photosynthesis. Because of PSI’s abundance in nature and its efficiency with charge transfer and separation, there is a great interest in applying the protein in photoactive electrodes. Here, we developed a completely organic, transparent, conductive electrode using reduced graphene oxide (RGO) on which a multilayer of PSI could be deposited. The resulting photoactive electrode demonstrated current densities comparable to that of a gold electrode modified with a multilayer film of PSI and significantly higher than that of a graphene electrode modified with a monolayer film of PSI. The relatively large photocurrents produced by integrating PSI with RGO and using an opaque, organic mediator can be applied to the facile production of more economic solar energy conversion devices.
Co-reporter:Tesniem F. Shinawi, Danielle W. Kimmel, and David E. Cliffel
Analytical Chemistry 2013 Volume 85(Issue 24) pp:11677
Publication Date(Web):November 14, 2013
DOI:10.1021/ac402764x
Fluorescent dyes have been designed for internal cellular component specificity and have been used extensively in the scientific community as a means to monitor cell growth, location, morphology, and viability. However, it is possible that the introduction of these dyes influences the basal function of the cell and, in turn, the results of these studies. Electrochemistry provides a noninvasive method for probing the unintended cellular affects of these dyes. The multianalyte microphysiometer (MAMP) is capable of simultaneous electrochemical measurement of extracellular metabolites in real-time. In this study, analytes central to cellular metabolism, glucose, lactate, oxygen, as well as extracellular acidification were monitored to determine the immediate metabolic effects of nuclear stains, including SYTO, DAPI dilactate, Hoechst 33342, and FITC dyes upon the pheochromocytoma PC-12 cells and RAW 264.7 macrophages. The experimental results revealed that the SYTO dye 13 significantly decreased glucose and oxygen consumption and increased extracellular acidification and lactate production in both cell lines, indicating a shift to anaerobic respiration. No other dyes caused significantly definitive changes in cellular metabolism upon exposure. This study shows that fluorescent dyes can have unintended effects on cellular metabolism and care should be taken when using these probes to investigate cellular function and morphology.
Co-reporter:Gabriel LeBlanc;Gongping Chen;Evan A. Gizzie;G. Kane Jennings
Advanced Materials 2012 Volume 24( Issue 44) pp:5959-5962
Publication Date(Web):
DOI:10.1002/adma.201202794
Co-reporter:Kellen M. Harkness, Brian N. Turner, Amanda C. Agrawal, Yibin Zhang, John A. McLean and David E. Cliffel  
Nanoscale 2012 vol. 4(Issue 13) pp:3843-3851
Publication Date(Web):02 May 2012
DOI:10.1039/C2NR30467H
Gold nanoparticles (AuNPs) protected by self-assembled monolayers (SAMs) are capable of presenting precisely engineered surfaces at the nanoscale, allowing the mimicry of biomacromolecules on an artificial platform. Here we review the generation, characterization, and applications of monolayer-protected AuNPs that have been designed for immunorecognition by the integration of an oligopeptide epitope into the protecting monolayer. The resulting peptide–AuNP conjugate is an effective platform for biomimesis, as demonstrated by multiple studies. Recent work is presented and future directions for this field of research are discussed.
Co-reporter:Danielle W. Kimmel, Gabriel LeBlanc, Mika E. Meschievitz, and David E. Cliffel
Analytical Chemistry 2012 Volume 84(Issue 2) pp:685
Publication Date(Web):November 1, 2011
DOI:10.1021/ac202878q
Co-reporter:Jennifer R. McKenzie, Amy M. Palubinsky, Jacquelynn E. Brown, BethAnn McLaughlin, and David E. Cliffel
ACS Chemical Neuroscience 2012 Volume 3(Issue 7) pp:510
Publication Date(Web):April 22, 2012
DOI:10.1021/cn300003r
Metabolic adaptation to stress is a crucial yet poorly understood phenomenon, particularly in the central nervous system (CNS). The ability to identify essential metabolic events which predict neuronal fate in response to injury is critical to developing predictive markers of outcome, for interpreting CNS spectroscopic imaging, and for providing a richer understanding of the relevance of clinical indices of stress which are routinely collected. In this work, real-time multianalyte microphysiometry was used to dynamically assess multiple markers of aerobic and anaerobic respiration through simultaneous electrochemical measurement of extracellular glucose, lactate, oxygen, and acid. Pure neuronal cultures and mixed cultures of neurons and glia were compared following a 90 min exposure to aglycemia. This stress was cytotoxic to neurons yet resulted in no appreciable increase in cell death in age-matched mixed cultures. The metabolic profile of the cultures was similar in that aglycemia resulted in decreases in extracellular acidification and lactate release in both pure neurons and mixed cultures. However, oxygen consumption was only diminished in the neuron enriched cultures. The differences became more pronounced when cells were returned to glucose-containing media upon which extracellular acidification and oxygen consumption never returned to baseline in cells fated to die. Taken together, these data suggest that lactate release is not predictive of neuronal survival. Moreover, they reveal a previously unappreciated relationship of astrocytes in maintaining oxygen uptake and a correlation between metabolic recovery of neurons and extracellular acidification.Keywords: acidosis; electrochemical; Glycemic stress; metabolism; multianalyte microphysiometry; real-time; stroke
Co-reporter:Reese S. Harry, Leslie A. Hiatt, Danielle W. Kimmel, Clare K. Carney, Kristin C. Halfpenny, David E. Cliffel, and David W. Wright
Chemical Research in Toxicology 2012 Volume 25(Issue 8) pp:1643
Publication Date(Web):July 16, 2012
DOI:10.1021/tx3001048
Metabolic profiling of macrophage metabolic response upon exposure to 4-hydroxynonenal (HNE) demonstrates that HNE does not simply inactivate superoxide-generating enzymes but also could be responsible for the impairment of downfield signaling pathways. Multianalyte microphysiometry (MAMP) was employed to simultaneously measure perturbations in extracellular acidification, lactate production, and oxygen consumption for the examination of aerobic and anaerobic pathways. Combining the activation of oxidative burst with phorbol myristate acetate (PMA) and the immunosuppression with HNE, the complex nature of HNE toxicity was determined to be concentration- and time-dependent. Further analysis was utilized to assess the temporal effect of HNE on reactive oxygen species (ROS) production and on protein kinase C (PKC). Increased levels of HNE with decreasing PKC activity suggest that PKC is a target for HNE adductation prior to oxidative burst. Additionally, localization of PKC to the cell membrane was prevented with the introduction of HNE, demonstrating a consequence of HNE adductation on NADPH activation. The impairment of ROS by HNE suggests that HNE has a greater role in foam cell formation and tissue damage than is already known. Although work has been performed to understand the effect of HNE's regulation of specific signaling pathways, details regarding its involvement in cellular metabolism as a whole are generally unknown. This study examines the impact of HNE on macrophage oxidative burst and identifies PKC as a key protein for HNE suppression and eventual metabolic response.
Co-reporter:Leslie A. Hiatt, David E. Cliffel
Sensors and Actuators B: Chemical 2012 174() pp: 245-252
Publication Date(Web):
DOI:10.1016/j.snb.2012.06.095
Co-reporter:Leslie A. Hiatt, Jennifer R. McKenzie, Leila F. Deravi, Reese S. Harry, David W. Wright, David E. Cliffel
Biosensors and Bioelectronics 2012 Volume 33(Issue 1) pp:128-133
Publication Date(Web):15 March 2012
DOI:10.1016/j.bios.2011.12.038
The miniaturization of electrochemical sensors allows for the minimally invasive and cost effective examination of cellular responses at a high efficacy rate. In this work, an ink-jet printed superoxide dismutase electrode was designed, characterized, and utilized as a novel microfluidic device to examine the metabolic response of a 2D layer of macrophage cells. Since superoxide production is one of the first indicators of oxidative burst, macrophage cells were exposed within the microfluidic device to phorbol myristate acetate (PMA), a known promoter of oxidative burst, and the production of superoxide was measured. A 46 ± 19% increase in current was measured over a 30 min time period demonstrating successful detection of sustained macrophage oxidative burst, which corresponds to an increase in the superoxide production rate by 9 ± 3 attomoles/cell/s. Linear sweep voltammetry was utilized to show the selectivity of this sensor for superoxide over hydrogen peroxide. This novel controllable microfluidic system can be used to study the impact of multiple effectors from a large number of bacteria or other invaders along a 2D layer of macrophages, providing an in vitro platform for improved electrochemical studies of metabolic responses.Highlights► IJP of SOD does not affect enzymatic activity and produces reproducible electrodes. ► SOD SPE had enhanced selectivity and increased sensitivity over unmodified Pt. ► Continual stimuli of a 2D layer of cells results in sustained oxidative burst. ► Real-time cellular responses can be detected with SPE and microfluidic technology.
Co-reporter:Gabriel LeBlanc, Gongping Chen, G. Kane Jennings, and David E. Cliffel
Langmuir 2012 Volume 28(Issue 21) pp:7952-7956
Publication Date(Web):May 11, 2012
DOI:10.1021/la301019t
Using the abundance of available electrons generated by immobilized multilayers of the photoactive protein complex Photosystem I (PSI), we have photoreduced platinum particles that are catalytically active for the H2/H+ redox couple. The resulting platinized PSI films were optimized using electrochemical measurements and then characterized using X-ray photoelectron spectroscopy (XPS), scanning electron microscopy (SEM), energy dispersive X-ray spectroscopy (EDX), and scanning electrochemical microscopy (SECM). These results demonstrate a novel method for generating immobilized platinum catalysts that are readily available on the surface of a photoactive PSI multilayer.
Co-reporter:Xun Yan, Christopher J. Faulkner, G. Kane Jennings, and David E. Cliffel
Langmuir 2012 Volume 28(Issue 42) pp:15080-15086
Publication Date(Web):September 25, 2012
DOI:10.1021/la302611a
Photosystem I (PSI) is a membrane protein complex that generates photoinduced electrons and transfers them across the thylakoid membrane during photosynthesis. The PSI complex, separated from spinach leaves, was spread onto the air–water interface as a monolayer and transferred onto a gold electrode surface that was precoated with a self-assembled monolayer (SAM). The electrochemical properties of the transferred PSI monolayer, including cyclic voltammetry and photoinduced chronoamperometry, were measured. The results showed that PSI retained its bioactivity after the manipulation. Its capability of converting photoenergy into electrical potential was demonstrated by its reducing an electron acceptor, dichloroindophenol (DCIP), and by oxidizing an electron donor, sodium ascorbate (ASC). We have shown that the protein has two possible orientations at the water interface. The orientation distribution was determined by comparing the controlled reductive and oxidative photocurrents generated from Langmuir–Blodgett and Langmuir–Schaefer monolayers.
Co-reporter:Carrie A. Simpson, Amanda C. Agrawal, Andrzej Balinski, Kellen M. Harkness, and David E. Cliffel
ACS Nano 2011 Volume 5(Issue 5) pp:3577
Publication Date(Web):April 7, 2011
DOI:10.1021/nn103148x
Monolayer-protected gold nanoparticles have great potential as novel building blocks for the design of new drugs and therapeutics based on the easy ability to multifunctionalize them for biological targeting and drug activity. In order to create nanoparticles that are biocompatible in vivo, polyethylene glycol functional groups have been added to many previous multifunctionalized particles to eliminate nonspecific binding. Recently, monolayer-protected gold nanoparticles with mercaptoglycine functionalities were shown to elicit deleterious effects on the kidney in vivo that were eliminated by incorporating a long-chain, mercapto-undecyl-tetraethylene glycol at very high loadings into a mixed monolayer. These long-chain PEGs induced an immune response to the particle presumably generating an anti-PEG antibody as seen in other long-chain PEG-ylated nanoparticles in vivo. In the present work, we explore the in vivo effects of high and low percent ratios of a shorter chain, mercapto-tetraethylene glycol within the monolayer using simple place-exchange reactions. The shorter chain PEG MPCs were expected to have better water solubility due to elimination of the alkyl chain, no toxicity, and long-term circulation in vivo. Shorter chain lengths at lower concentrations should not trigger the immune system to create an anti-PEG antibody. We found that a 10% molar exchange of this short-chain PEG within the monolayer met three of the desired goals: high water solubility, no toxicity, and no immune response as measured by white blood cell counts. However, none of the short-chain PEG mixed monolayer compositions enabled the nanoparticles to have a long circulation time within the blood as compared to mercapto-undecyl-ethylene glycol, which had a residence time of 4 weeks. We also compared the effects of a hydroxyl versus a carboxylic acid terminal functional group on the end of the PEG thiol on both clearance and immune response. The results indicate that short-chain-length PEGs, regardless of termini, increase clearance rates compared to the previous long-chain PEG studies, while carboxylated termini increase red blood cell counts at high loadings. Given these findings, short-chain, alcohol-terminated PEG, exchanged at 10%, was identified as a potential nanoparticle for further in vivo applications requiring short circulation lifetimes with desired features of no toxicity, no immune response, and high water solubility.Keywords: murine study; nanoparticle; PEG-TMPC; TMPC
Co-reporter:Dr. Kellen M. Harkness;Andrzej Balinski; John A. McLean; David E. Cliffel
Angewandte Chemie International Edition 2011 Volume 50( Issue 45) pp:10554-10559
Publication Date(Web):
DOI:10.1002/anie.201102882
Co-reporter:Scott A. Miller;Leslie A. Hiatt;Robert G. Keil
Analytical and Bioanalytical Chemistry 2011 Volume 399( Issue 3) pp:1021-1029
Publication Date(Web):2011 January
DOI:10.1007/s00216-010-4419-8
Immunoassays are important tools for the rapid detection and identification of pathogens, both clinically and in the research laboratory. An immunoassay with the potential for the detection of influenza was developed and tested using hemagglutinin (HA), a commonly studied glycoprotein found on the surface of influenza virions. Gold nanoparticles were synthesized, which present multiple peptide epitopes, including the HA epitope, in order to increase the gravimetric response achieved with the use of a QCM immunosensor for influenza. Specifically, epitopes associated with HA and FLAG peptides were affixed to gold nanoparticles by a six-mer PEG spacer between the epitope and the terminal cysteine. The PEG spacer was shown to enhance the probability for interaction with antibodies by increasing the distance the epitope extends from the gold surface. These nanoparticles were characterized using thermogravimetric analysis, transmission electron microscopy, matrix-assisted laser desorption/ionization-time of flight, and 1H nuclear magnetic resonance analysis. Anti-FLAG and anti-HA antibodies were adhered to the surface of a QCM, and the response of each antibody upon exposure to HA, FLAG, and dual functionalized nanoparticles was compared with binding of Au–tiopronin nanoparticles and H5 HA proteins from influenza virus (H5N1). Results demonstrate that the immunoassay was capable of differentiating between nanoparticles presenting orthogonal epitopes in real-time with minimal nonspecific binding. The detection of H5 HA protein demonstrates the logical extension of using these nanoparticle mimics as a safe positive control in the detection of influenza, making this a vital step in improving influenza detection methodology.
Co-reporter:Momchil Velkovsky;Rachel Snider
Journal of Mathematical Chemistry 2011 Volume 49( Issue 1) pp:251-275
Publication Date(Web):2011 January
DOI:10.1007/s10910-010-9744-9
An analytic approach to the modeling of stop-flow amperometric measurements of cellular metabolism with thin glucose oxidase and lactate oxidase electrodes would provide a mechanistic understanding of the various factors that affect the measured signals. We divide the problem into two parts: (1) analytic formulas that provide the boundary conditions for the substrate and the hydrogen peroxide at the outer surface of the enzyme electrode layers and the electrode current expressed through these boundary conditions, and (2) a simple diffusion problem in the liquid compartment with the provided boundary conditions, which can be solved analytically or numerically, depending on the geometry of the compartment. The current in an amperometric stop-flow measurement of cellular glucose or lactate consumption/excretion is obtained analytically for two geometries, corresponding to devices developed at the Vanderbilt Institute for Integrative Biosystems Research and Education: a multianalyte nanophysiometer with effective one-dimensional diffusion and a multianalyte microphysiometer, for which plentiful data for metabolic changes in cells are available. The data are calibrated and fitted with the obtained time dependences to extract several cellular fluxes. We conclude that the analytical approach is applicable to a wide variety of measurement geometries and flow protocols.
Co-reporter:Kellen M. Harkness, Brian C. Hixson, Larissa S. Fenn, Brian N. Turner, Amanda C. Rape, Carrie A. Simpson, Brian J. Huffman, Tracy C. Okoli, John A. McLean, and David E. Cliffel
Analytical Chemistry 2010 Volume 82(Issue 22) pp:9268
Publication Date(Web):October 22, 2010
DOI:10.1021/ac102175z
It is becoming increasingly common to use gold nanoparticles (AuNPs) protected by a heterogeneous mixture of thiolate ligands, but many ligand mixtures on AuNPs cannot be properly characterized due to the inherent limitations of commonly used spectroscopic techniques. Using ion mobility−mass spectrometry (IM-MS), we have developed a strategy that allows measurement of the relative quantity of ligands on AuNP surfaces. This strategy is used for the characterization of three samples of mixed-ligand AuNPs: tiopronin:glutathione (av diameter 2.5 nm), octanethiol:decanethiol (av diameter 3.6 nm), and tiopronin:11-mercaptoundecyl(poly ethylene glycol) (av diameter 2.5 nm). For validation purposes, the results obtained for tiopronin:glutathione AuNPs were compared to parallel measurements using nuclear magnetic resonance (NMR) spectroscopy and mass spectrometry (MS) without ion mobility separation. Relative quantitation measurements for NMR and IM-MS were in excellent agreement, with an average difference of less than 1% relative abundance. IM-MS and MS without ion mobility separation were not comparable, due to a lack of ion signals for MS. The other two mixed-ligand AuNPs provide examples of measurements that cannot be performed using NMR spectroscopy.
Co-reporter:Kellen M. Harkness, Larissa S. Fenn, David E. Cliffel and John A. McLean
Analytical Chemistry 2010 Volume 82(Issue 7) pp:3061
Publication Date(Web):March 15, 2010
DOI:10.1021/ac100251d
Matrix-assisted laser desorption/ionization-ion mobility-mass spectrometry (MALDI-IM-MS) was used to analyze low mass gold-thiolate fragments generated from thiolate-protected gold nanoparticles (AuNPs). This is the first report of using gas-phase structural separations by IM-MS for the characterization of AuNPs, revealing significant structural variation between organic and gold-thiolate ionic species. Through the separation of background chemical noise, gold-thiolate ion species corresponding to fragments from the AuNP surface can be isolated. In the negative ion mode, many of these fragments correlate to capping structural motifs observed in the literature. In the positive ion mode, the fragment ions do not correlate to predicted structural motifs, but are nearly identical to the positive ions generated from the gold-thiolate AuNP precursor complexes. This suggests that energetic processes during laser desorption/ionization induce a structural rearrangement in the capping gold-thiolate structure of the AuNP, resulting in the generation of positively charged gold-thiolate complexes similar to the precursors of AuNP formation by reduction and negatively charged complexes more representative of the AuNP surface.
Co-reporter:Madalina Ciobanu, Helen A. Kincaid, Vivian Lo, Albert D. Dukes, G. Kane Jennings, David E. Cliffel
Journal of Electroanalytical Chemistry 2007 Volume 599(Issue 1) pp:72-78
Publication Date(Web):1 January 2007
DOI:10.1016/j.jelechem.2006.09.019
Direct electrochemistry studies on Photosystem I (PSI) were performed using cyclic voltammetry and square wave voltammetry. PSI centers stabilized in aqueous solution by Triton X-100 surfactant were adsorbed on hydroxyl-terminated hexanethiol modified gold electrodes. We have identified the electron donor, P700, and the electron acceptor sites, FA/FB, based on the previously reported preferred orientation for P700 on hydroxyl-terminated self-assembled monolayers. The reported potential values (EP700 = +0.51 V vs. NHE; EFA/FB = −0.36 V vs. NHE) correlate very well with the established literature for P700, while the weaker signal for FA/FB lies within previous literature values. We were able to identify both redox centers on the same voltammogram. The P700 center clearly shows reversible electrochemical behavior. The expected FA/FB reduction is small in comparison, reflecting the dominant orientation of PSI with the FA/FB centers farther away and the P700 center nearer the electrode surface. As a molecular diode, PSI does not permit reverse direction conductivity to the FB so the small FA/FB peaks reflect other orientations besides the predominant one. PSI adsorbed on a hydroxyl-terminated hexanethiol modified gold substrate displays a photoenhanced reduction current for the P700+ center in the presence of light and an electron acceptor, methyl viologen. This photoelectrochemical response demonstrates protein functionality after adsorption.
Co-reporter:Jeremy P. Wilburn, David W. Wright and David E. Cliffel  
Analyst 2006 vol. 131(Issue 2) pp:311-316
Publication Date(Web):30 Nov 2005
DOI:10.1039/B510649D
Voltage-gated biological ion channels were simulated by insertion of the peptaibol antibiotic alamethicin into reconstituted phosphatidylcholine bilayer lipid membranes (BLMs). Scanning electrochemical microscopy (SECM) was utilized to probe initial BLM resistivity, the insertion of alamethicin pores, and mass transport across the membrane. Acquired SECM images show the spatial location of inserted pore bundles, the verification of voltage control over the pore conformational state (open/closed), and variations in passive mass transport corresponding to different topographical areas of the BLM. SECM images were also used to evaluate overall BLM integrity prior to insertion as well as transport (flux in open state) and leakage (flux in closed state) currents following insertion.
Co-reporter:Sven E. Eklund, Rachel M. Snider, John Wikswo, Franz Baudenbacher, Ales Prokop, David E. Cliffel
Journal of Electroanalytical Chemistry 2006 Volume 587(Issue 2) pp:333-339
Publication Date(Web):15 February 2006
DOI:10.1016/j.jelechem.2005.11.024
The determination of temporal fluxes of cellular metabolic analytes promises to revolutionize the study of metabolomics and systems biology. A review of our work on the multianalyte microphysiometer (MMP), an instrument capable of measuring extracellular changes in the flux rates of oxygen, glucose, lactate, and acid, is presented as a useful tool in extracting cellular metabolic information. Applications are reviewed in three areas: biodefense agent discrimination by monitoring changes in metabolic fluxes in response to ricin, botulinum and cholera toxins, as well as anthrax protective antigen (PA); cancer cell studies in relation to hypoxia and cell proliferation; and the short term effects of environmental agents on cell populations. Future directions include the incorporation of additional electrodes, improvements in temporal and spatial metabolic flux analysis, and miniaturization of the cell chamber and sensor technology for more cost effective and high-throughput applications in drug screening and discovery.
Co-reporter:Aren E. Gerdon;David W. Wright Dr. Dr.
Angewandte Chemie 2006 Volume 118(Issue 4) pp:
Publication Date(Web):15 DEC 2005
DOI:10.1002/ange.200503328

Keineswegs sekundär: Konformative und lineare Peptidepitope des Schutzantigens von B. anthracis wurden auf der Oberfläche von Monoschicht-geschützten Clustern präsentiert, um immunreaktive Nanostrukturen zu erhalten. Quarzkristallmikrowaagen-Studien an diesen Antigenmimetika mit Antikörpern legten einen deutlichen Unterschied nahe zwischen zwei Epitopen mit gleicher Primärstruktur, jedoch unterschiedlicher Sekundärstruktur.

Co-reporter:Aren E. Gerdon, David W. Wright,David E. Cliffel
Angewandte Chemie International Edition 2006 45(4) pp:594-598
Publication Date(Web):
DOI:10.1002/anie.200503328
Interleukin 4 (human) (9CI)
Caspase-3
4,4'-Bipyridinium, 1,1'-dimethyl-, dichloride, hydrate
Hydrozincite(Zn5(CO3)2(OH)6)
Ethane
EC 1.1.3.4
N-(2-mercaptopropionyl)glycine
Prostaglandin E2